PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0395s0025.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WOX

Protein Properties

Length: 285aa MW: 31777.2 Da PI: 6.0026

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0395s0025.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.8	6e-21	102	162	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t+ ql++Le+ F k n +ps++++++++++l +++e++V++WFqNrRa+ k+ Kaladp0395s0025.1.p 102 RQRWAPTPAQLQILENIFDKgNGTPSKQKIKDITSELsqhgQVSETNVYNWFQNRRARAKR 162 89***************99************************************97 PP
2	Wus_type_Homeobox	100.2	1.5e-32	101	164	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RW+Ptp Q++iLe+++++G tP+k++i++it+eL+++G+++++NV++WFQNr+aR ++kq Kaladp0395s0025.1.p 101 ARQRWAPTPAQLQILENIFDKGNGTPSKQKIKDITSELSQHGQVSETNVYNWFQNRRARAKRKQ 164 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MEWEKQPPQH HHHHVHSHGG DALIGEGAAA AAAGLLQEQL VVMTDEQIEI LRKQIAVYTV 60 LCDKLVEMHR SLSSQRDLSG VRFGNTYCDQ LLISSGHKIS ARQRWAPTPA QLQILENIFD 120 KGNGTPSKQK IKDITSELSQ HGQVSETNVY NWFQNRRARA KRKQTVPATN NNETDGIKEV 180 DSSNEKKAKE ENFQSHQIPC SLSDDSCYQS SAMNSDLHSF DPLSSKAEAM FSSEDDLKPP 240 TTLGDISFYD SILSNRRVDQ LSGAVEVEGG YHPYHQTDDY NLMG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	164	RRARAKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	6e-67	WOX family protein