PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0337s0008.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 464aa MW: 51561 Da PI: 4.5449

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0337s0008.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	278	321	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N+++ +Lr+l+Pk + Kl+ a+iL A++++k+Lq Kaladp0337s0008.2.p 278 IAERKRRKKLNERLYKLRSLVPKiS------KLDRASILGDAIDFLKELQ 321 79*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEQLRTLVSV HGWECCVVWR VSKDQRFIEW LDCCCAGAEN LPQEPTFAAS QCRDSVILHS 60 RTKACDLLAQ FPPFMLIEDS GVYAETLISN QPRWLHLSQS STSADMPQFA TRLLIPVPGG 120 LIELFAARPV SENQHIIDCI AEYSKLPPEK EANSISSTDM TAFYNEISLF GPKFETTNST 180 DIFFDEFMNQ LYNSSVKDGL LQGMDSMLVS DVSNTGVPVK GSGNDRGQQG HDVMEAAGNI 240 EMGRSDSISD CSDQLDEDDA DAIYRKKSGK GPQSKNLIAE RKRRKKLNER LYKLRSLVPK 300 ISKLDRASIL GDAIDFLKEL QKQKKDLEDE LQQQQSDDEY HHEDTNPFLG QTEDTMDQDQ 360 LEAQVEVSKI DGGDALFIKL LCENKPGSFV GVLEALDHLG LEVTNVNINT HETFVSNVLL 420 VQGKEGSCVM VEADSVKDSL LSTTRNSIPT GSLRRPNLAA RQQ*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEQLRTLVSV HGWECCVVWR VSKDQRFIEW LDCCCAGAEN LPQEPTFAAS QCRDSVILHS  60
RTKACDLLAQ FPPFMLIEDS GVYAETLISN QPRWLHLSQS STSADMPQFA TRLLIPVPGG  120
LIELFAARPV SENQHIIDCI AEYSKLPPEK EANSISSTDM TAFYNEISLF GPKFETTNST  180
DIFFDEFMNQ LYNSSVKDGL LQGMDSMLVS DVSNTGVPVK GSGNDRGQQG HDVMEAAGNI  240
EMGRSDSISD CSDQLDEDDA DAIYRKKSGK GPQSKNLIAE RKRRKKLNER LYKLRSLVPK  300
ISKLDRASIL GDAIDFLKEL QKQKKDLEDE LQQQQSDDEY HHEDTNPFLG QTEDTMDQDQ  360
LEAQVEVSKI DGGDALFIKL LCENKPGSFV GVLEALDHLG LEVTNVNINT HETFVSNVLL  420
VQGKEGSCVM VEADSVKDSL LSTTRNSIPT GSLRRPNLAA RQQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	286	RKKSGKGPQSKNLIAERKRRKK
2	280	287	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-69	bHLH family protein