PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0278s0008.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 840aa MW: 95852.6 Da PI: 9.7493

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0278s0008.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.1e-07	226	269	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rWT Ed+ l+ vk+ + +W Ia +g++Rt+ qc r+q Kaladp0278s0008.3.p 226 RWTRTEDKELLLIVKEKEMSNWIDIAVSLGTNRTPFQCLARFQR 269 9***************************************9995 PP
2	Myb_DNA-binding	35.5	2.2e-11	278	321	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W +eEd +l av+ +G +W +a+ + +Rt+ qc +rw k Kaladp0278s0008.3.p 278 REWEEEEDARLCAAVRVFGESNWQMVASVLD-KRTGTQCSNRWKK 321 68***************************.*********98 PP
3	Myb_DNA-binding	43.7	6.5e-14	331	375	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grWT +Ed++ + vk++G ++W++Ia+ ++ gRt qc++rw + Kaladp0278s0008.3.p 331 GRWTIDEDKRMKVSVKLFGAKCWSKIAQFVP-GRTQVQCRERWVNC 375 8****************************.*********986 PP
4	Myb_DNA-binding	42.7	1.3e-13	384	425	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT++Ed++l a++++ W+++a++++ Rt++qc+ rw Kaladp0278s0008.3.p 384 PWTEDEDLKLMTAITEYNYC-WSKVAACIP-PRTDNQCRRRWMV 425 8***************99.*****.9********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MHEPTLLPVK GSGFPRPAQL LLDSIKKNRL CQKLIHNRLI QIEARIEESK KLKDRVKILK 60 DFQVSTRKRV GLVLSQKKDH RVQLISAPKR GEKKASAMKF GPEDNRDVAF YKDAITKFPL 120 ALQRQRWSNE ERDNLRKGIK QEFQKALLEK SVDLISYSEG SYGISSDIDN VMASIKGLEI 180 TPENIRAYLP KVNWDNFASI YHQGRSGAEC EARWLNWEDP LRNNTRWTRT EDKELLLIVK 240 EKEMSNWIDI AVSLGTNRTP FQCLARFQRS LNAQMVKREW EEEEDARLCA AVRVFGESNW 300 QMVASVLDKR TGTQCSNRWK KSLNPARVRV GRWTIDEDKR MKVSVKLFGA KCWSKIAQFV 360 PGRTQVQCRE RWVNCLDPSL NWDPWTEDED LKLMTAITEY NYCWSKVAAC IPPRTDNQCR 420 RRWMVLCPDD VYRLQAAKKI QQVALISNFV DRETERPDLG PEDFVPPLIL CPAFEPYSEE 480 PTNKRKRKRR EKRASPMNNA EYNMGCSDSQ KKKRCPRRRK EAQVDNEATL GAVDVNEATE 540 AVICLNEYVD TGDEGKCGRS NYLKRKKYKP RRKARAENVP VQSKAFLPAA QSESMLMNHS 600 FSHEIPVENN TTSTQKRRTT IKQNKKKSCS IYKKNDYEFA AGTLSLQMQT PDKSASIPGA 660 IVATSKSCKR ERVTASSSLK DAVSFHRPSS CSCCLESIVC HQGAVNGTRV NGELIAGKAA 720 ACLEENDFIP LASLGKRDKN FSQNEAEYAQ EANSRSEMNN KFCCEQPATS LGEDDSLALT 780 SFIKRKRNVC NARIENGHNV DKGRKMEIIS VEQVGAGLNE DDIPLALFIK KVKRVKEKI*

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MHEPTLLPVK GSGFPRPAQL LLDSIKKNRL CQKLIHNRLI QIEARIEESK KLKDRVKILK  60
DFQVSTRKRV GLVLSQKKDH RVQLISAPKR GEKKASAMKF GPEDNRDVAF YKDAITKFPL  120
ALQRQRWSNE ERDNLRKGIK QEFQKALLEK SVDLISYSEG SYGISSDIDN VMASIKGLEI  180
TPENIRAYLP KVNWDNFASI YHQGRSGAEC EARWLNWEDP LRNNTRWTRT EDKELLLIVK  240
EKEMSNWIDI AVSLGTNRTP FQCLARFQRS LNAQMVKREW EEEEDARLCA AVRVFGESNW  300
QMVASVLDKR TGTQCSNRWK KSLNPARVRV GRWTIDEDKR MKVSVKLFGA KCWSKIAQFV  360
PGRTQVQCRE RWVNCLDPSL NWDPWTEDED LKLMTAITEY NYCWSKVAAC IPPRTDNQCR  420
RRWMVLCPDD VYRLQAAKKI QQVALISNFV DRETERPDLG PEDFVPPLIL CPAFEPYSEE  480
PTNKRKRKRR EKRASPMNNA EYNMGCSDSQ KKKRCPRRRK EAQVDNEATL GAVDVNEATE  540
AVICLNEYVD TGDEGKCGRS NYLKRKKYKP RRKARAENVP VQSKAFLPAA QSESMLMNHS  600
FSHEIPVENN TTSTQKRRTT IKQNKKKSCS IYKKNDYEFA AGTLSLQMQT PDKSASIPGA  660
IVATSKSCKR ERVTASSSLK DAVSFHRPSS CSCCLESIVC HQGAVNGTRV NGELIAGKAA  720
ACLEENDFIP LASLGKRDKN FSQNEAEYAQ EANSRSEMNN KFCCEQPATS LGEDDSLALT  780
SFIKRKRNVC NARIENGHNV DKGRKMEIIS VEQVGAGLNE DDIPLALFIK KVKRVKEKI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	490	KRKRKRR
2	484	513	KRKRKRREKRASPMNNAEYNMGCSDSQKKK
3	485	514	KRKRKRREKRASPMNNAEYNMGCSDSQKKK
4	485	490	RKRKRR
5	485	492	RKRKRREK
6	485	493	RKRKRREKR
7	486	515	KRKRKRREKRASPMNNAEYNMGCSDSQKKK
8	487	516	KRKRKRREKRASPMNNAEYNMGCSDSQKKK
9	487	494	RKRKRREK
10	516	520	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.2	1e-158	MYB family protein