PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0266s0005.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30596.8 Da PI: 10.5322 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 56 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l ++vk+ G ++W++ + m+ Rt+k+c++rw+++l Kaladp0266s0005.1.p 56 RGPWSPEEDDQLRKLVKKNGRRNWSKLGSFMN--RTGKSCRLRWHNHL 101 89*****************************7..************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 112 | 154 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + T++Ed+ +v +k+ G++ W++Ia++++ gRt++q+k+rw++ Kaladp0266s0005.1.p 112 PITPQEDKVIVTMHKRVGNR-WSLIAQKLP-GRTDNQVKNRWNST 154 67******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MAPYFWLANR NGEEKENEKE KDRILGDRWW WPGDDISAVE GEISENGEEG GDKLRRGPWS 60 PEEDDQLRKL VKKNGRRNWS KLGSFMNRTG KSCRLRWHNH LKPGVVPVTL GPITPQEDKV 120 IVTMHKRVGN RWSLIAQKLP GRTDNQVKNR WNSTLRRRRQ HALNQQQQRK ATGRATAPWA 180 NRVKPGPDLG GGCGSLAGPG RVSGPERLQY FGCIEGARSL MHPVSPPEPE VRPFPCMAPP 240 APASEPSSVI AQLKGVVEGI CQEELKLRNS ML* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 6e-32 | MYB family protein |