PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0210s0002.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 513aa MW: 57145.2 Da PI: 4.7471

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0210s0002.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.4	6.9e-15	319	361	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er RRd++N+++ +L++l+P++ kK + a+i+e A+eYIk+L Kaladp0210s0002.2.p 319 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 361 78********************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MQIIQTGTCV AMYEETACFD PNPIADEGAI QVISNDLASI PPHGNMESSI AIPHFDFDEN 60 VKFPVDEFFY KSSSKEDSMV APTNVVASSA VGTEFQQQMA YDVENCYYGT ESDSRMQEAI 120 HEVNQALSYE QSNWVASGDY EVQDMCYSSE NQQQMLQDEL VHNGQGIYTS SSVLDVPHPS 180 APDLLHLLHL PRSPSSASFL PNSTISFVNA SQSSTNFQNG AGLMDAASSS AMFYDPLLHL 240 NLPPQPPIFK DLFQSLPHGF NLPVPMTGSL FARMDEMERS RGLYHDVDGH LIDDGVLEFT 300 ADMPPQMVKG RNGKLKPFAT ERDRRDNLNN KYTTLKSLIP SPKKTDRASI VEDAIEYIKE 360 LTRTINELKV LVEKKRRVKE RMKMLKTEAS PDPESSSDVK HNSELNEPLR SSWLQRKSKD 420 TEVDVRIIDD ELTVKLSQRK KANCLLTMSK ILEELQLDLQ HVSGGQVGDF YSFVCNTKIG 480 ETSCVYAGGI AKRLIEGVER QQAGLGTNKI SF*

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MQIIQTGTCV AMYEETACFD PNPIADEGAI QVISNDLASI PPHGNMESSI AIPHFDFDEN  60
VKFPVDEFFY KSSSKEDSMV APTNVVASSA VGTEFQQQMA YDVENCYYGT ESDSRMQEAI  120
HEVNQALSYE QSNWVASGDY EVQDMCYSSE NQQQMLQDEL VHNGQGIYTS SSVLDVPHPS  180
APDLLHLLHL PRSPSSASFL PNSTISFVNA SQSSTNFQNG AGLMDAASSS AMFYDPLLHL  240
NLPPQPPIFK DLFQSLPHGF NLPVPMTGSL FARMDEMERS RGLYHDVDGH LIDDGVLEFT  300
ADMPPQMVKG RNGKLKPFAT ERDRRDNLNN KYTTLKSLIP SPKKTDRASI VEDAIEYIKE  360
LTRTINELKV LVEKKRRVKE RMKMLKTEAS PDPESSSDVK HNSELNEPLR SSWLQRKSKD  420
TEVDVRIIDD ELTVKLSQRK KANCLLTMSK ILEELQLDLQ HVSGGQVGDF YSFVCNTKIG  480
ETSCVYAGGI AKRLIEGVER QQAGLGTNKI SF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	374	379	KKRRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	5e-54	bHLH family protein