PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0192s0048.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 399aa MW: 44639 Da PI: 6.2978

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0192s0048.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl Kaladp0192s0048.1.p 16 KGPWSPKEDLRLISFIQKYGHENWRALPKQAGLLRCGKSCRLRWINYL 63 79****************************99**********97 PP
2	Myb_DNA-binding	49.2	1.3e-15	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e ++++ + G++ W++Ia++++ gRt++++k+ w+++l Kaladp0192s0048.1.p 69 RGNFTKEEEETIIRLQQSIGNK-WSRIAAHLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGRGRAPCCD KSRVTKGPWS PKEDLRLISF IQKYGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTKEEEETI IRLQQSIGNK WSRIAAHLPG RTDNEIKNVW NTHLKKKLTS 120 RAAVSVPKED QVTKESPSSA IKFSFSSSAQ VESNPNNNQK NEKYSQINLL PLDGSPTILA 180 PNISTLANPV TELHDSESFN NFGNTSQHND HLFNSSGINQ LEQFTLWEDP NILESLLNTE 240 EDPNWVLAPQ NTQPDSTKDN FSGELSVVSE FDLWSTLKID GIPAPAKPDD KEGNKIHTVE 300 APMGMNTAHE YITDKDIDSM FRYLETEPRL PEISVEMIEK PKQYQGVNLS HIIPAAATGS 360 AVNETPGVDY FPVASISHLS LSKVLPEDQP THLFGSKN*

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGRGRAPCCD KSRVTKGPWS PKEDLRLISF IQKYGHENWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDLKRG NFTKEEEETI IRLQQSIGNK WSRIAAHLPG RTDNEIKNVW NTHLKKKLTS  120
RAAVSVPKED QVTKESPSSA IKFSFSSSAQ VESNPNNNQK NEKYSQINLL PLDGSPTILA  180
PNISTLANPV TELHDSESFN NFGNTSQHND HLFNSSGINQ LEQFTLWEDP NILESLLNTE  240
EDPNWVLAPQ NTQPDSTKDN FSGELSVVSE FDLWSTLKID GIPAPAKPDD KEGNKIHTVE  300
APMGMNTAHE YITDKDIDSM FRYLETEPRL PEISVEMIEK PKQYQGVNLS HIIPAAATGS  360
AVNETPGVDY FPVASISHLS LSKVLPEDQP THLFGSKN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	4e-73	MYB family protein