PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0131s0030.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 364aa MW: 41561.2 Da PI: 8.2914

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0131s0030.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.4	4.7e-24	54	133	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++e++ Li++rre++ +++ k++k+lWe++s+kmr++gf rsp++C++kw+nl k++k+++ +++++ +++++++le Kaladp0131s0030.1.p 54 WSQDEIRSLINLRREVDGLFNTCKSNKHLWEQISAKMRKKGFDRSPNMCTDKWRNLLKEFKRVRCQDGGN-----GKMSWYKELE 133 ****************************************************************999984.....2456788886 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MYVSEKPRPT DVYKRVGRVM MVEPISVSPR MMTTGESSGE DHEMKAPKKR AETWSQDEIR 60 SLINLRREVD GLFNTCKSNK HLWEQISAKM RKKGFDRSPN MCTDKWRNLL KEFKRVRCQD 120 GGNGKMSWYK ELEELLRNRS SRHAAPAKVV DSYMHLDDKV VENDVITYGP AEGSRPAVNL 180 ETQLDHDGDA LPIPITPVDP VIANGVPPWS WRETPGTGEQ PLPYGGRVIS VKWGDYTRRI 240 GIDGSTEAIK EAIKSAFRLR SKRAFWLEDE HQIIRTLDRN MPLGNYTLYL DEGITIKICL 300 YGGADRIIIR TEEKTFYTEE HFHEYLSRRG LTGLSELNNG FRSIDALDDL RPGGAYQGVR 360 IID*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MYVSEKPRPT DVYKRVGRVM MVEPISVSPR MMTTGESSGE DHEMKAPKKR AETWSQDEIR  60
SLINLRREVD GLFNTCKSNK HLWEQISAKM RKKGFDRSPN MCTDKWRNLL KEFKRVRCQD  120
GGNGKMSWYK ELEELLRNRS SRHAAPAKVV DSYMHLDDKV VENDVITYGP AEGSRPAVNL  180
ETQLDHDGDA LPIPITPVDP VIANGVPPWS WRETPGTGEQ PLPYGGRVIS VKWGDYTRRI  240
GIDGSTEAIK EAIKSAFRLR SKRAFWLEDE HQIIRTLDRN MPLGNYTLYL DEGITIKICL  300
YGGADRIIIR TEEKTFYTEE HFHEYLSRRG LTGLSELNNG FRSIDALDDL RPGGAYQGVR  360
IID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-150	Trihelix family protein