PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0103s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 356aa MW: 38079.6 Da PI: 9.7026

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0103s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.8	2.2e-21	43	134	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +W+++e+ aLi+a+r+++ +lrrg+lk+ +W+ev++++ ++++qC++k+e+l+kry+ + +++++ s+ +s++++f+++ Kaladp0103s0009.1.p 43 CWSHDETIALIDAYRDKWYSLRRGNLKAFHWQEVADAVagrcPLASPAKTAVQCRHKMEKLRKRYRSEIQRARSMpVSRFTSSWVHFKRM 132 8***********************************76553444589*********************97799********* PP trihelix 86 ea 87 +a Kaladp0103s0009.1.p 133 DA 134 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MAGSPPSPHP DDSNAHHSPP PSQPPQQAQP TSQPSSRRLP PPCWSHDETI ALIDAYRDKW 60 YSLRRGNLKA FHWQEVADAV AGRCPLASPA KTAVQCRHKM EKLRKRYRSE IQRARSMPVS 120 RFTSSWVHFK RMDAMEKGPT LAKPVDDSAS DEDNDDEDDA ELEGYEFPDV GRYGRNGGSG 180 GKAGFGLVGN GVGGSGSGGG YSGGGGGGFR IKIPNGVSIA KPGSGFRSKG HGKYDDLPTA 240 SPNLGPLAAR DGYWKGSGGS RAGGGAGAGG SGSGKREREG DAVSEMVAAI NMLADGFVKT 300 EQKKMEMARE IEVMRMDMET KRLKMILESQ ERVMEAFTKA TSDKKKPKRM AASPE*

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MAGSPPSPHP DDSNAHHSPP PSQPPQQAQP TSQPSSRRLP PPCWSHDETI ALIDAYRDKW  60
YSLRRGNLKA FHWQEVADAV AGRCPLASPA KTAVQCRHKM EKLRKRYRSE IQRARSMPVS  120
RFTSSWVHFK RMDAMEKGPT LAKPVDDSAS DEDNDDEDDA ELEGYEFPDV GRYGRNGGSG  180
GKAGFGLVGN GVGGSGSGGG YSGGGGGGFR IKIPNGVSIA KPGSGFRSKG HGKYDDLPTA  240
SPNLGPLAAR DGYWKGSGGS RAGGGAGAGG SGSGKREREG DAVSEMVAAI NMLADGFVKT  300
EQKKMEMARE IEVMRMDMET KRLKMILESQ ERVMEAFTKA TSDKKKPKRM AASPE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-54	Trihelix family protein