PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0147.5.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 399aa    MW: 44541.6 Da    PI: 4.4914
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0147.5.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.56.6e-36561472102
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl+k+ye++ed+e++e++sws   nsf+v+d+++f++++LpkyFkh+nf+SF+RQLn+YgF+kv+ ++         weF+++ F  g+k
  Kaladp0102s0147.5.p  56 FLTKTYEMVEDPETDEVVSWSGARNSFIVWDSNRFSTTLLPKYFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQK 136
                          9********************999*****************************************999.........************* PP

                          XXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkks 102
                          +ll++ikr+++
  Kaladp0102s0147.5.p 137 HLLKTIKRRRH 147
                          ********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MDRAKTTVKE EEVVITSNGM TSGGGIPSSA ASSTTTTTSS APRPMEGLHD TGPPPFLTKT  60
YEMVEDPETD EVVSWSGARN SFIVWDSNRF STTLLPKYFK HNNFSSFIRQ LNTYGFRKVD  120
PDRWEFANEG FLGGQKHLLK TIKRRRHVAQ NVQQHGGSSV CVEVGQYGLE GQLERLRRDR  180
SVLMTEILRL KQEQQESREY IVAMQNRLQA TERKQQQMMN FLARALNNPS FIQQFMLESA  240
ERRALDGANM KRKRRLTAST SAENLKEQID ILAVQDDSLG LGQGLQAQDD LTNMESEIEN  300
LFAAGLESES SNDVRLPPRA ESMAKAGGSN LGSVNETLWD ELLSDDLVAD NEDDEQLFLG  360
DIPDIDVPVE DLGGADPSDW GEDLQDLVDQ MNFLKSKP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139145LKTIKRR
2175180RLRRDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-127HSF family protein