PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0102s0125.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 284aa MW: 30734.7 Da PI: 7.2079 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5.2e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEde+l +++++G+g +W + +++ g++R++k+c++rw++yl Kaladp0102s0125.1.p 14 RGPWCPEEDEILRSYIELHGTGgNWIALPSKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 42.9 | 1.1e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++T+eEd + + ++G++ W+ Ia+++ gRt++++k++w++ Kaladp0102s0125.1.p 69 GAFTEEEDRVIFSLYSEMGSR-WSVIAARLH-GRTDNDVKNHWNT 111 89*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MGRAPCCDKA KVKRGPWCPE EDEILRSYIE LHGTGGNWIA LPSKAGLKRC GKSCRLRWLN 60 YLRPDIKHGA FTEEEDRVIF SLYSEMGSRW SVIAARLHGR TDNDVKNHWN TKLKKLMVMK 120 DQREAYAAAH SSSVSSHRES YSFVKFPNMK AKTHQESASA VPNLQPGVFG YGGSSLAFAH 180 CDPVGLTAPT GLMAMPACYA SKAESDLSGG SSSVNNGEGF LIDMLNYGEG VGDGCHELLQ 240 SAVLGSSDQK CSGTEDLAGN GAVPTFSAML SEYMYQGGLV DQY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 7e-68 | MYB family protein |