PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0102s0089.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 931aa MW: 103719 Da PI: 5.0115

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0102s0089.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.3e-18	32	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l Kaladp0102s0089.2.p 32 KGQWTAEEDEILSKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 78 799**************************9.**********986 PP
2	Myb_DNA-binding	63.6	3.7e-20	84	130	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++v q+G + W+tIa++++ gR +kqc++rw+++l Kaladp0102s0089.2.p 84 KGPWSKEEDEVIVQLVSQYGAKKWSTIAQHLP-GRIGKQCRERWHNHL 130 79****************************.***********97 PP
3	Myb_DNA-binding	49.3	1.2e-15	136	178	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r++WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ Kaladp0102s0089.2.p 136 RDAWTQEEELALIQAHQVYGNK-WAELTKFLP-GRTDNAIKNHWN 178 789*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MNHASQDGAG DRRPKMRPPH GRTSGPTRRS TKGQWTAEED EILSKAVQRF KGKNWKKIAE 60 CFKDRTDVQC LHRWQKVLNP ELIKGPWSKE EDEVIVQLVS QYGAKKWSTI AQHLPGRIGK 120 QCRERWHNHL NPAINRDAWT QEEELALIQA HQVYGNKWAE LTKFLPGRTD NAIKNHWNSS 180 VKKKMETYIA SGLLSKFQGL PHVGGRNQSM SSPASRTQQS SGDESNHKGN DIEDISECSQ 240 GSTAPGCSQN ASDMTNKIFH ARNGFNHTNC SDQMKRERRE ESSEEYFASI EEVNMSIPKI 300 EEFPGMSLLE LGQDQRYGSA ANDSNELLYM PYHNSSLMTA EMSGCEDASI LHASNIQIHD 360 SKGTSASQTT YMRSEAVENS RFQAPSCDSS HLHFHENQLQ YGCGLSQVDN FTSGTEGQDL 420 VGRPCSEFML TENFTEPLCN DGTEYTDLCG HVDNIQFAHD IPDEAAKLAE CSQSAPPTDE 480 LPAAKVEERE QKGGSLFYEP PRFPSLDVPF FSCDLVSSND LQQEYSPLGI RQLMMSSMNC 540 LTPFRLWDSP ARENSPDALL KSAAKTFNGT PSILKKRHRD LLSPLSDRRM DKRLDSDSKQ 600 NSFSSLARDF SNLDVMFEET ATCSTTNQKR DSVSFGDDKE NVDPALMRQK EVERGSSEKD 660 NILCCNEEEK SSNDDADQKM QHDADADAQI VQKSSENLSD NDLENILIFS PDQVGLEADR 720 VFIPNAWANP PSSATQHASS INSPSVSRRS LATGSSSKCM PPSYLEIEVS KAGQETGTEN 780 NCSMFGSTPF KRSFESPSAW KSPWFINSFL PGPRVDTDIS IEDIGYFLSP GERSYDALGL 840 MEQLSERSAA AIAEAHGILG IETPKTTLRE GHPDTYDNQP GSHFAQDALP ERRVLDFSEC 900 ETPGKESEVR TESPSVKLFS PSSYLIKGCR *

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MNHASQDGAG DRRPKMRPPH GRTSGPTRRS TKGQWTAEED EILSKAVQRF KGKNWKKIAE  60
CFKDRTDVQC LHRWQKVLNP ELIKGPWSKE EDEVIVQLVS QYGAKKWSTI AQHLPGRIGK  120
QCRERWHNHL NPAINRDAWT QEEELALIQA HQVYGNKWAE LTKFLPGRTD NAIKNHWNSS  180
VKKKMETYIA SGLLSKFQGL PHVGGRNQSM SSPASRTQQS SGDESNHKGN DIEDISECSQ  240
GSTAPGCSQN ASDMTNKIFH ARNGFNHTNC SDQMKRERRE ESSEEYFASI EEVNMSIPKI  300
EEFPGMSLLE LGQDQRYGSA ANDSNELLYM PYHNSSLMTA EMSGCEDASI LHASNIQIHD  360
SKGTSASQTT YMRSEAVENS RFQAPSCDSS HLHFHENQLQ YGCGLSQVDN FTSGTEGQDL  420
VGRPCSEFML TENFTEPLCN DGTEYTDLCG HVDNIQFAHD IPDEAAKLAE CSQSAPPTDE  480
LPAAKVEERE QKGGSLFYEP PRFPSLDVPF FSCDLVSSND LQQEYSPLGI RQLMMSSMNC  540
LTPFRLWDSP ARENSPDALL KSAAKTFNGT PSILKKRHRD LLSPLSDRRM DKRLDSDSKQ  600
NSFSSLARDF SNLDVMFEET ATCSTTNQKR DSVSFGDDKE NVDPALMRQK EVERGSSEKD  660
NILCCNEEEK SSNDDADQKM QHDADADAQI VQKSSENLSD NDLENILIFS PDQVGLEADR  720
VFIPNAWANP PSSATQHASS INSPSVSRRS LATGSSSKCM PPSYLEIEVS KAGQETGTEN  780
NCSMFGSTPF KRSFESPSAW KSPWFINSFL PGPRVDTDIS IEDIGYFLSP GERSYDALGL  840
MEQLSERSAA AIAEAHGILG IETPKTTLRE GHPDTYDNQP GSHFAQDALP ERRVLDFSEC  900
ETPGKESEVR TESPSVKLFS PSSYLIKGCR *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-114	MYB family protein