PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0102s0056.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 356aa MW: 40121.7 Da PI: 9.4771

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0102s0056.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.1	2.4e-16	7	84	6	87
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 +++d ++++ l lp++f e++g k ++ ++l+ ++g +W+v++ +k+s++++l++GW +F+++ g+k g f+vF +d Kaladp0102s0056.2.p 7 VTADITTRSKLKLPRRFGERCGAKVPG--NVRLQVPTGATWRVEV--KKNSNGVWLGEGWFKFAESLGVKYGHFLVFDYDAV 84 5789999999*********888666..6***********..*****************************9864 PP
2	B3	72.2	6.5e-23	256	347	6	99
..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 6 tpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +p + ++++l +p +f+e++ + k k+ tl++ +gr+W+vk++ +++ r ++t+GW +Fv++ngLk+gD+++F+l++ e +v Kaladp0102s0056.2.p 256 SPDGTARECQLLVPMPFIEAYfN-LKI--KDATLRTDDGRKWSVKYRLARYRPRSYFTSGWTQFVRDNGLKAGDVCLFELIRGAENAIKV 342 55566788***********53.433..489************99999999***********************986666899 PP EEE-S CS B3 95 kvfrk 99 +fr+ Kaladp0102s0056.2.p 343 VIFRA 347 88885 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MKFFRIVTAD ITTRSKLKLP RRFGERCGAK VPGNVRLQVP TGATWRVEVK KNSNGVWLGE 60 GWFKFAESLG VKYGHFLVFD YDAVRAVFHV VAIGMSAVET EYPTVSSIDD DDDQSGRNPR 120 LSNLKRRKIE KDDDDDDDDV VILKDDANLG RSKPQKCQAP GKKAKASKCE VDQSMCGNGS 180 VRSDDGDLTT TKKRGKFERE IILNRERMIQ CIVQGRGRNN RANDQAEKAI ERAKSFKADE 240 PVCIIALSPC YVTRESPDGT ARECQLLVPM PFIEAYFNLK IKDATLRTDD GRKWSVKYRL 300 ARYRPRSYFT SGWTQFVRDN GLKAGDVCLF ELIRGAENAI KVVIFRAISE DEAVK*

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MKFFRIVTAD ITTRSKLKLP RRFGERCGAK VPGNVRLQVP TGATWRVEVK KNSNGVWLGE  60
GWFKFAESLG VKYGHFLVFD YDAVRAVFHV VAIGMSAVET EYPTVSSIDD DDDQSGRNPR  120
LSNLKRRKIE KDDDDDDDDV VILKDDANLG RSKPQKCQAP GKKAKASKCE VDQSMCGNGS  180
VRSDDGDLTT TKKRGKFERE IILNRERMIQ CIVQGRGRNN RANDQAEKAI ERAKSFKADE  240
PVCIIALSPC YVTRESPDGT ARECQLLVPM PFIEAYFNLK IKDATLRTDD GRKWSVKYRL  300
ARYRPRSYFT SGWTQFVRDN GLKAGDVCLF ELIRGAENAI KVVIFRAISE DEAVK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	165	KRRKIEKDDDDDDDDVVILKDDANLGRSKPQKCQAPGKKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	9e-26	B3 family protein