PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0056.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 395aa    MW: 44674.1 Da    PI: 9.64
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0056.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.4e-14571231787
                          E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                   B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                           lp++f e++g k ++   ++l+ ++g +W+v++  +k+s++++l++GW +F+++ g+k g f+vF +d  
  Kaladp0102s0056.1.p  57 KLPRRFGERCGAKVPG--NVRLQVPTGATWRVEV--KKNSNGVWLGEGWFKFAESLGVKYGHFLVFDYDAV 123
                          59********888666..6***************..*******************************9864 PP
2B371.97.9e-23295386699
                          ..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                   B3   6 tpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                          +p  + ++++l +p +f+e++ +  k   k+ tl++ +gr+W+vk++  +++ r ++t+GW +Fv++ngLk+gD+++F+l++  e   +v
  Kaladp0102s0056.1.p 295 SPDGTARECQLLVPMPFIEAYfN-LKI--KDATLRTDDGRKWSVKYRLARYRPRSYFTSGWTQFVRDNGLKAGDVCLFELIRGAENAIKV 381
                          55566788*************53.433..489****************99999999*************************986666899 PP

                          EEE-S CS
                   B3  95 kvfrk 99 
                           +fr+
  Kaladp0102s0056.1.p 382 VIFRA 386
                          88885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MKFFRIVTAD ITTRSKLVRT AKASPSLFMR SYLNNHTSSL LLFFLFEIVA MLFYLQKLPR  60
RFGERCGAKV PGNVRLQVPT GATWRVEVKK NSNGVWLGEG WFKFAESLGV KYGHFLVFDY  120
DAVRAVFHVV AIGMSAVETE YPTVSSIDDD DDQSGRNPRL SNLKRRKIEK DDDDDDDDVV  180
ILKDDANLGR SKPQKCQAPG KKAKASKCEV DQSMCGNGSV RSDDGDLTTT KKRGKFEREI  240
ILNRERMIQC IVQGRGRNNR ANDQAEKAIE RAKSFKADEP VCIIALSPCY VTRESPDGTA  300
RECQLLVPMP FIEAYFNLKI KDATLRTDDG RKWSVKYRLA RYRPRSYFTS GWTQFVRDNG  360
LKAGDVCLFE LIRGAENAIK VVIFRAISED EAVK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164204KRRKIEKDDDDDDDDVVILKDDANLGRSKPQKCQAPGKKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-23B3 family protein