PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0300.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 237aa MW: 27485.6 Da PI: 9.4755

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0300.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.7e-18	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+++W++Ia++++ gR++k+c++rw++ Kaladp0101s0300.1.p 4 RGHWRPAEDEKLRELVERYGPHNWNAIAEHLQ-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	55.9	1e-17	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ ++ +G++ W+ Iar+++ gRt++ +k++w+ Kaladp0101s0300.1.p 56 RNPFTEEEEERLLASHRVHGNK-WSVIARMFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MGTRGHWRPA EDEKLRELVE RYGPHNWNAI AEHLQGRSGK SCRLRWFNQL DPKINRNPFT 60 EEEEERLLAS HRVHGNKWSV IARMFPGRTD NAVKNHWHVI MARRCRERSR VYARRKAIQA 120 ASLHDQLQSN VHANNFNPFK HNSFSHLLPI FNGFYGASFS QSAGTAKVGH LNLDLTGSRH 180 HHHHHPVEFY NFMNINTNKS SSSEVINHTK EEEEVEQEQK IDVPFIDFLS VDKDSA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	6e-78	MYB family protein