PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0274.7.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 348aa MW: 39002.4 Da PI: 5.524

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0274.7.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.6	5.8e-13	23	68	3	48
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G++ +W+ +a+++ +t qc+ rw++yl Kaladp0101s0274.7.p 23 VWTQEEDDILREQIRIYGTDnSWAIVASEFS-DKTTRQCRRRWYTYL 68 6****************************.***********97 PP
2	Myb_DNA-binding	44.9	2.6e-14	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll + +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0101s0274.7.p 74 KGGWTPEEDALLCESQRKYGNK-WTEIAKMVS-GRTDNAVKNRFST 117 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MKKRSDSNST EGANKLKERH IVVWTQEEDD ILREQIRIYG TDNSWAIVAS EFSDKTTRQC 60 RRRWYTYLNS DFKKGGWTPE EDALLCESQR KYGNKWTEIA KMVSGRTDNA VKNRFSTLCK 120 KKAKREALAE EDSTSLSSVG KKRAWLKNQP HKTGTEENQV PYKKIRIRIS VPAESCNRGK 180 LIPGDYPLGE HTQIIPDLCE ESSGSSDYST GSTLLSHVTE GTPTNQTMDI SELNQDSGSE 240 IRISLGQKES EESMTIFGSL SYQDGFQSSQ EPTSEEVFSA ESAVEFGSPL QVIPLFPDES 300 AELPSPVFSE SERNFLIKAL GMETPHHPGT DQPQPQPVCK RVLLHSL*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MKKRSDSNST EGANKLKERH IVVWTQEEDD ILREQIRIYG TDNSWAIVAS EFSDKTTRQC  60
RRRWYTYLNS DFKKGGWTPE EDALLCESQR KYGNKWTEIA KMVSGRTDNA VKNRFSTLCK  120
KKAKREALAE EDSTSLSSVG KKRAWLKNQP HKTGTEENQV PYKKIRIRIS VPAESCNRGK  180
LIPGDYPLGE HTQIIPDLCE ESSGSSDYST GSTLLSHVTE GTPTNQTMDI SELNQDSGSE  240
IRISLGQKES EESMTIFGSL SYQDGFQSSQ EPTSEEVFSA ESAVEFGSPL QVIPLFPDES  300
AELPSPVFSE SERNFLIKAL GMETPHHPGT DQPQPQPVCK RVLLHSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	2e-57	MYB family protein