PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0101s0274.23.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 348aa MW: 39071.5 Da PI: 5.7364 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45 | 2.4e-14 | 23 | 67 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G+++W+ +a+++ +t qc+ rw++yl Kaladp0101s0274.23.p 23 VWTQEEDDILREQIRIYGTDNWAIVASEFS-DKTTRQCRRRWYTYL 67 6*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 44.9 | 2.6e-14 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll + +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0101s0274.23.p 73 KGGWTPEEDALLCESQRKYGNK-WTEIAKMVS-GRTDNAVKNRFST 116 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MKKRSDSNST EGANKLKERH IVVWTQEEDD ILREQIRIYG TDNWAIVASE FSDKTTRQCR 60 RRWYTYLNSD FKKGGWTPEE DALLCESQRK YGNKWTEIAK MVSGRTDNAV KNRFSTLCKK 120 KAKREALAEE DSTSLSSVGK KRAWLKNQPH KTGTEENQVP YKKIRRIRIS VPAESCNRGK 180 LIPGDYPLGE HTQIIPDLCE ESSGSSDYST GSTLLSHVTE GTPTNQTMDI SELNQDSGSE 240 IRISLGQKES EESMTIFGSL SYQDGFQSSQ EPTSEEVFSA ESAVEFGSPL QVIPLFPDES 300 AELPSPVFSE SERNFLIKAL GMETPHHPGT DQPQPQPVCK RVLLHSL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14350.1 | 5e-60 | MYB family protein |