PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0274.19.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 317aa    MW: 35482.3 Da    PI: 5.1966
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0274.19.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-132368348
                          SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
       Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                           WT+eEd++l + ++ +G++ +W+ +a+++   +t  qc+ rw++yl
  Kaladp0101s0274.19.p 23 VWTQEEDDILREQIRIYGTDnSWAIVASEFS-DKTTRQCRRRWYTYL 68
                          6******************************.*************97 PP
2Myb_DNA-binding45.12.3e-1474117146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
       Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                           +g WT+eEd ll +  +++G++ W+ Ia+++  gRt++ +k+r+ +
  Kaladp0101s0274.19.p  74 KGGWTPEEDALLCESQRKYGNK-WTEIAKMVS-GRTDNAVKNRFST 117
                           688*******************.*********.**********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MKKRSDSNST EGANKLKERH IVVWTQEEDD ILREQIRIYG TDNSWAIVAS EFSDKTTRQC  60
RRRWYTYLNS DFKKGGWTPE EDALLCESQR KYGNKWTEIA KMVSGRTDNA VKNRFSTLCK  120
KKAKREALAE EDSTSLSSVG KKRAWLKNQP HKTGTEENQV PYKKIRRIRI SVPAESCNRG  180
KLIPGDYPLG EHTQIIPDLC EESSGSSDYS TGSTLLSHVT EGTPTNQTMD ISELNQDSGS  240
EIRISLGQKE SEESMTIFGS LSYQDGFQSS QEPTSEEVFS AESAVEFGSP LQVIPLFPDE  300
SAELPSPVFS ESVSHA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14350.11e-58MYB family protein