PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0274.11.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 347aa MW: 38915.4 Da PI: 5.524

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0274.11.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.4e-14	23	67	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + ++ +G+++W+ +a+++ +t qc+ rw++yl Kaladp0101s0274.11.p 23 VWTQEEDDILREQIRIYGTDNWAIVASEFS-DKTTRQCRRRWYTYL 67 6***************************.***********97 PP
2	Myb_DNA-binding	44.9	2.6e-14	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll + +++G++ W+ Ia+++ gRt++ +k+r+ + Kaladp0101s0274.11.p 73 KGGWTPEEDALLCESQRKYGNK-WTEIAKMVS-GRTDNAVKNRFST 116 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MKKRSDSNST EGANKLKERH IVVWTQEEDD ILREQIRIYG TDNWAIVASE FSDKTTRQCR 60 RRWYTYLNSD FKKGGWTPEE DALLCESQRK YGNKWTEIAK MVSGRTDNAV KNRFSTLCKK 120 KAKREALAEE DSTSLSSVGK KRAWLKNQPH KTGTEENQVP YKKIRIRISV PAESCNRGKL 180 IPGDYPLGEH TQIIPDLCEE SSGSSDYSTG STLLSHVTEG TPTNQTMDIS ELNQDSGSEI 240 RISLGQKESE ESMTIFGSLS YQDGFQSSQE PTSEEVFSAE SAVEFGSPLQ VIPLFPDESA 300 ELPSPVFSES ERNFLIKALG METPHHPGTD QPQPQPVCKR VLLHSL*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MKKRSDSNST EGANKLKERH IVVWTQEEDD ILREQIRIYG TDNWAIVASE FSDKTTRQCR  60
RRWYTYLNSD FKKGGWTPEE DALLCESQRK YGNKWTEIAK MVSGRTDNAV KNRFSTLCKK  120
KAKREALAEE DSTSLSSVGK KRAWLKNQPH KTGTEENQVP YKKIRIRISV PAESCNRGKL  180
IPGDYPLGEH TQIIPDLCEE SSGSSDYSTG STLLSHVTEG TPTNQTMDIS ELNQDSGSEI  240
RISLGQKESE ESMTIFGSLS YQDGFQSSQE PTSEEVFSAE SAVEFGSPLQ VIPLFPDESA  300
ELPSPVFSES ERNFLIKALG METPHHPGTD QPQPQPVCKR VLLHSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	4e-59	MYB family protein