PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0273.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 327aa    MW: 36708.6 Da    PI: 6.6965
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0273.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.9e-1895147456
                          -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++++ eq+++Le+ Fe+ +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  Kaladp0101s0273.1.p  95 KRRLNMEQVKTLEKSFEMGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 147
                          55899***********************************************9 PP
2HD-ZIP_I/II132.51.5e-4294185293
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kkrrl+ eqvk+LE+sFe+ +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+aLkr++da+k++ne+L++++++L++++
  Kaladp0101s0273.1.p  94 KKRRLNMEQVKTLEKSFEMGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDALKRQFDAVKAHNEALQAQNQKLQSQI 183
                          9***************************************************************************************99 PP

          HD-ZIP_I/II  92 ke 93 
                          ++
  Kaladp0101s0273.1.p 184 SA 185
                          75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MSCNGMAFFP ANFMLQTSQD QEDEDDNHQR HHHHQPPVFP PQDFNGVAAF LGGKRSMPLM  60
QQDHNHACED TKIHNGDQDH ELSDDGSLLA GDPKKRRLNM EQVKTLEKSF EMGNKLEPER  120
KLQLARALGL QPRQIAIWFQ NRRARWKTKQ LEKDYDALKR QFDAVKAHNE ALQAQNQKLQ  180
SQISALMSGG GAAAAVATES FNLNKETIDQ GSCSNRSENS SDHQTNMVKL DMMSRAVTGP  240
ASESSPSQQI PTSMPLFPTS SSTTTTTNSM RPASSSNLSA TQLFFHHHGH HQQHGVKEEN  300
FVSNMFCGIE DQSGFWPWLE QHQNFN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142150RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-83HD-ZIP family protein