PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0244.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Whirly
Protein Properties Length: 279aa    MW: 30871.1 Da    PI: 10.0671
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0244.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly208.29e-651032411139
               Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkv 90 
                          svyk+kaal+v+++ p+f  l+sg++k+ ++G++ll++a+a + r+ydW++kq+f+ls+ e+++l++l++kesceffhdp++++s+eGkv
  Kaladp0101s0244.2.p 103 SVYKGKAALTVEPRGPEFAPLESGSFKVAKDGFVLLQFAPASGLRQYDWSRKQVFSLSVVEIGTLMSLGPKESCEFFHDPFKGKSDEGKV 192
                          79**************************************************************************************** PP

               Whirly  91 rkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                          rk+lkvePl+dG+G+f+nlsv+n+l++ +es+++P++kaefa+l+s+++
  Kaladp0101s0244.2.p 193 RKVLKVEPLADGTGHFFNLSVQNKLLNMDESIYIPITKAEFAILNSVFN 241
                          *********************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MTSLQILPHS LQTRNPRLLP NSRFPLEGSV HRIARSSIIS RSPSSEIATK KSLKNQTSFI  60
LCRRSEYFEP QRFDSSRPSY DRPGGSGGGE GGDFQTRVFV GHSVYKGKAA LTVEPRGPEF  120
APLESGSFKV AKDGFVLLQF APASGLRQYD WSRKQVFSLS VVEIGTLMSL GPKESCEFFH  180
DPFKGKSDEG KVRKVLKVEP LADGTGHFFN LSVQNKLLNM DESIYIPITK AEFAILNSVF  240
NFILPHLIGW HAYATSIKPG GASRVNNTGS PVDYEWNR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-110Whirly family protein