PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0101s0244.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Whirly | ||||||||
Protein Properties | Length: 279aa MW: 30871.1 Da PI: 10.0671 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 208.2 | 9e-65 | 103 | 241 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkv 90 svyk+kaal+v+++ p+f l+sg++k+ ++G++ll++a+a + r+ydW++kq+f+ls+ e+++l++l++kesceffhdp++++s+eGkv Kaladp0101s0244.1.p 103 SVYKGKAALTVEPRGPEFAPLESGSFKVAKDGFVLLQFAPASGLRQYDWSRKQVFSLSVVEIGTLMSLGPKESCEFFHDPFKGKSDEGKV 192 79**************************************************************************************** PP Whirly 91 rkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 rk+lkvePl+dG+G+f+nlsv+n+l++ +es+++P++kaefa+l+s+++ Kaladp0101s0244.1.p 193 RKVLKVEPLADGTGHFFNLSVQNKLLNMDESIYIPITKAEFAILNSVFN 241 *********************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MTSLQILPHS LQTRNPRLLP NSRFPLEGSV HRIARSSIIS RSPSSEIATK KSLKNQTSFI 60 LCRRSEYFEP QRFDSSRPSY DRPGGSGGGE GGDFQTRVFV GHSVYKGKAA LTVEPRGPEF 120 APLESGSFKV AKDGFVLLQF APASGLRQYD WSRKQVFSLS VVEIGTLMSL GPKESCEFFH 180 DPFKGKSDEG KVRKVLKVEP LADGTGHFFN LSVQNKLLNM DESIYIPITK AEFAILNSVF 240 NFILPHLIGW HAYATSIKPG GASRVNNTGS PVDYEWNR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-110 | Whirly family protein |