PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0204.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 469aa MW: 50691.4 Da PI: 4.8767

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0204.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.7	1.4e-06	13	75	6	56
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft++++ e+e+ + n+ p +e LA+k ++ +qV +WFqN+R+ +k Kaladp0101s0204.1.p 13 RFTPSEVAEMEAILSEhnNKLPPRELFVTLADKFsngperigkiTVQMKQVWNWFQNKRYAMK 75 589999999999998655888999999999999999999999889999***********9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MGRPPGNGGP AFRFTPSEVA EMEAILSEHN NKLPPRELFV TLADKFSNGP ERIGKITVQM 60 KQVWNWFQNK RYAMKAKSNK SQAAKLDVAP LQAVPPLAPA ALAPALQSVP PVRQEVNGKA 120 PNNMEFEARS ARDGAWYDVA AFLSVRNKDT DDPEVLVRFV GLTPEEDEWI KVSKHVRHRS 180 LPCEASECVA VLPGDLILCF QEAPEQALYF DAHVLDAQRM KHDSRGCRCS FMVRYDHDQF 240 EEVVPLRKIC RRPETDYRLQ IYQALPDLPA QQKKIVQSSA CSAPLEDNPV AESVQMPAQK 300 VDDNTAPASS APSSPVAREK NTAGSLEEGN PGHVTADNAS KLTRKAEESV DQDAETKRPR 360 PSDHTENPVG QDASTPAVMP ESDKQDETQG VADSAVEQKG SSPRQQDPAG PCAVVKEKEA 420 VSNDVAEVDD GDPNPGGGAL TCQNQTNGHT GGSGGGSSDV AVGVQQCF*

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MGRPPGNGGP AFRFTPSEVA EMEAILSEHN NKLPPRELFV TLADKFSNGP ERIGKITVQM  60
KQVWNWFQNK RYAMKAKSNK SQAAKLDVAP LQAVPPLAPA ALAPALQSVP PVRQEVNGKA  120
PNNMEFEARS ARDGAWYDVA AFLSVRNKDT DDPEVLVRFV GLTPEEDEWI KVSKHVRHRS  180
LPCEASECVA VLPGDLILCF QEAPEQALYF DAHVLDAQRM KHDSRGCRCS FMVRYDHDQF  240
EEVVPLRKIC RRPETDYRLQ IYQALPDLPA QQKKIVQSSA CSAPLEDNPV AESVQMPAQK  300
VDDNTAPASS APSSPVAREK NTAGSLEEGN PGHVTADNAS KLTRKAEESV DQDAETKRPR  360
PSDHTENPVG QDASTPAVMP ESDKQDETQG VADSAVEQKG SSPRQQDPAG PCAVVKEKEA  420
VSNDVAEVDD GDPNPGGGAL TCQNQTNGHT GGSGGGSSDV AVGVQQCF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	357	361	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-112	HB-other family protein