PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0149.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 648aa    MW: 70571 Da    PI: 5.0258
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0149.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.77e-30204257155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          +pr++WtpeLH++Fv+av+qL G++kA+Pk+il++m+v+gLt+e+v+SHLQkYR+
  Kaladp0101s0149.2.p 204 RPRVVWTPELHRKFVSAVNQL-GIDKAVPKKILDVMDVEGLTRENVASHLQKYRM 257
                          59*******************.********************************8 PP
2Myb_DNA-binding41.72.6e-13206256148
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          r  WT+e++ ++v av+qlG +   +k+I   m  +g+t++++ s++qky+
  Kaladp0101s0149.2.p 206 RVVWTPELHRKFVSAVNQLGIDkaVPKKILDVMDvEGLTRENVASHLQKYR 256
                          678***********************************************7 PP
3Response_reg79.79.6e-27191271109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+++ +  ++++l++ +y +v+++  ++eale+l+e++  +D++++D++mp++dG++ll++i  e  +lp+i+++ ++ + ++ +
  Kaladp0101s0149.2.p  19 VLCVDDDQTCLFWMENLLKSCQY-NVTTTLYAREALEMLRENKriYDIVITDVQMPDIDGFQLLETIGLEM-DLPVIMMSIYDHQGYVSR 106
                          89*********************.***************99999***********************6654.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           ++ Ga d+l Kp+  ee+ +
  Kaladp0101s0149.2.p 107 GVHHGAVDYLLKPVRLEEIQN 127
                          *****************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 648 aa     Download sequence    
MGPEQEKEID DQFPVGIRVL CVDDDQTCLF WMENLLKSCQ YNVTTTLYAR EALEMLRENK  60
RIYDIVITDV QMPDIDGFQL LETIGLEMDL PVIMMSIYDH QGYVSRGVHH GAVDYLLKPV  120
RLEEIQNIWQ HVLRKRKGLD KGKKVVTQDK SSPGAGNGAV ANSIASAGDT SDKRGRDPSD  180
KDDEDYEEED DSGRENEEQT SQKRPRVVWT PELHRKFVSA VNQLGIDKAV PKKILDVMDV  240
EGLTRENVAS HLQKYRMYLK RISNGNPQQG MFGALGGRHA LDAMGYRGGR LHNSLLSGYP  300
PSLSGILSGR VNSSNGVNFR SISSSDLIQS GQNLRNSINP LAKPNVMPSL QNGSLFQGMR  360
GGFEQDPTQA SKAMTQLADF NPGLGATGLR VSENLMDPKV VLNGSSSRKM LPAPSQFSQT  420
GASPVPGALR IGGMPGAPSN NAGMMNHSGT SDSWKSAAQF PQSSFQMGGS GSENGTFTQD  480
QHLPINNNAM NGIASTGIQP QLLGFPQMLA PLRNSNIGMQ GELGMHNAEH IKQQEYTQEL  540
NNLFGSLNPI MTSGGSIMGS MGTDQNHLVA NGGNFVGQQT GILGPDPNFK PSNDSFVPEQ  600
ANLSQDDFIP NNVESLDEIM NTMIRRDNNG ASSLFMDGDF NFDVEGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-88ARR-B family protein