PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0149.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 659aa    MW: 71871.5 Da    PI: 5.1914
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0149.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.77.2e-30215268155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          +pr++WtpeLH++Fv+av+qL G++kA+Pk+il++m+v+gLt+e+v+SHLQkYR+
  Kaladp0101s0149.1.p 215 RPRVVWTPELHRKFVSAVNQL-GIDKAVPKKILDVMDVEGLTRENVASHLQKYRM 268
                          59*******************.********************************8 PP
2Myb_DNA-binding41.72.7e-13217267148
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          r  WT+e++ ++v av+qlG +   +k+I   m  +g+t++++ s++qky+
  Kaladp0101s0149.1.p 217 RVVWTPELHRKFVSAVNQLGIDkaVPKKILDVMDvEGLTRENVASHLQKYR 267
                          678***********************************************7 PP
3Response_reg79.79.8e-27301381109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+++ +  ++++l++ +y +v+++  ++eale+l+e++  +D++++D++mp++dG++ll++i  e  +lp+i+++ ++ + ++ +
  Kaladp0101s0149.1.p  30 VLCVDDDQTCLFWMENLLKSCQY-NVTTTLYAREALEMLRENKriYDIVITDVQMPDIDGFQLLETIGLEM-DLPVIMMSIYDHQGYVSR 117
                          89*********************.***************99999***********************6654.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           ++ Ga d+l Kp+  ee+ +
  Kaladp0101s0149.1.p 118 GVHHGAVDYLLKPVRLEEIQN 138
                          *****************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MNKDDRKNKA VMGPEQEKEI DDQFPVGIRV LCVDDDQTCL FWMENLLKSC QYNVTTTLYA  60
REALEMLREN KRIYDIVITD VQMPDIDGFQ LLETIGLEMD LPVIMMSIYD HQGYVSRGVH  120
HGAVDYLLKP VRLEEIQNIW QHVLRKRKGL DKGKKVVTQD KSSPGAGNGA VANSIASAGD  180
TSDKRGRDPS DKDDEDYEEE DDSGRENEEQ TSQKRPRVVW TPELHRKFVS AVNQLGIDKA  240
VPKKILDVMD VEGLTRENVA SHLQKYRMYL KRISNGNPQQ GMFGALGGRH ALDAMGYRGG  300
RLHNSLLSGY PPSLSGILSG RVNSSNGVNF RSISSSDLIQ SGQNLRNSIN PLAKPNVMPS  360
LQNGSLFQGM RGGFEQDPTQ ASKAMTQLAD FNPGLGATGL RVSENLMDPK VVLNGSSSRK  420
MLPAPSQFSQ TGASPVPGAL RIGGMPGAPS NNAGMMNHSG TSDSWKSAAQ FPQSSFQMGG  480
SGSENGTFTQ DQHLPINNNA MNGIASTGIQ PQLLGFPQML APLRNSNIGM QGELGMHNAE  540
HIKQQEYTQE LNNLFGSLNP IMTSGGSIMG SMGTDQNHLV ANGGNFVGQQ TGILGPDPNF  600
KPSNDSFVPE QANLSQDDFI PNNVESLDEI MNTMIRRDNN GASSLFMDGD FNFDVEGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.16e-88ARR-B family protein