PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0101s0091.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 20574.9 Da PI: 4.7653 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 7.7e-17 | 22 | 69 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +++g+Wv+eIr+p+ + r++lg+f t+e+Aa+a++aa+++l+g Kaladp0101s0091.1.p 22 YRGIR--SRSGKWVSEIREPR----KaSRIWLGTFPTPEMAAAAYDAAALALKG 69 99996..678*********94....36************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MSHTPSSSSS SSSSSIHSTI TYRGIRSRSG KWVSEIREPR KASRIWLGTF PTPEMAAAAY 60 DAAALALKGR EAVLNFPASV GTYPVPTTSS AADIRACAAA AAKQKKAEIS SVDHKQGSVI 120 DDEDDNDDDD KNGVNVGGKG LSEFWDEDEI FRMPNLLADM AEGMMVSPPR MVPEPSPESP 180 VNYERLWSYF * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12630.1 | 2e-36 | ERF family protein |