PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0006.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 490aa MW: 52376.9 Da PI: 7.4975

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0006.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.3	3.1e-16	100	185	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + L++++ ++ ++l+rg+l++ +We v++ + e++ +s +qCk+k++nl+kr+k + ++ +++ +++s++ +f+++e Kaladp0101s0006.1.p 100 EWSDAAISSLLDVYIDKYTQLNRGNLRGRDWEVVAEMVNEKQKsCKSVEQCKNKIDNLKKRFKVEVQRISSG-GTAVSSWHWFKKME 185 5***********************************77665268***************9999998.566679*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MASCNDGFSP FADDDVHHHH HQQRFSSHHI SADHDPSPNK VSAAGESDAD SGYPGGDESD 60 QIRDSSGGRG PYYYKKLKPT LLNGAGSESA CVDYRKDREE WSDAAISSLL DVYIDKYTQL 120 NRGNLRGRDW EVVAEMVNEK QKSCKSVEQC KNKIDNLKKR FKVEVQRISS GGTAVSSWHW 180 FKKMEEIVGN SPSVTKCTPE DDRTGIVAAS AAAVVGNGIA SSSSFTSRHA KRYSPSPATL 240 NNLKPKPAPK WKRVVFKISG GALVGSGQNI DPKIAMQIAN EVATACQLGV EVAIVTGGSN 300 FFCGTSWVSD TGFDRPTAYQ IGMMATVMNS ILLQSALEKS GVQARVQTAF ALPEVAEPYS 360 KQRAIRHLEK GRVVIFGGIG AGTGNPLFST DTAAALRATE INADAVLKGT NVDGVYDCRS 420 GDAGGILVRS SYREIISGGV APMDLMAITF CEESGTPVVI FNMLEPGNIT KALCGNRVGT 480 LIDIGGRIS*

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MASCNDGFSP FADDDVHHHH HQQRFSSHHI SADHDPSPNK VSAAGESDAD SGYPGGDESD  60
QIRDSSGGRG PYYYKKLKPT LLNGAGSESA CVDYRKDREE WSDAAISSLL DVYIDKYTQL  120
NRGNLRGRDW EVVAEMVNEK QKSCKSVEQC KNKIDNLKKR FKVEVQRISS GGTAVSSWHW  180
FKKMEEIVGN SPSVTKCTPE DDRTGIVAAS AAAVVGNGIA SSSSFTSRHA KRYSPSPATL  240
NNLKPKPAPK WKRVVFKISG GALVGSGQNI DPKIAMQIAN EVATACQLGV EVAIVTGGSN  300
FFCGTSWVSD TGFDRPTAYQ IGMMATVMNS ILLQSALEKS GVQARVQTAF ALPEVAEPYS  360
KQRAIRHLEK GRVVIFGGIG AGTGNPLFST DTAAALRATE INADAVLKGT NVDGVYDCRS  420
GDAGGILVRS SYREIISGGV APMDLMAITF CEESGTPVVI FNMLEPGNIT KALCGNRVGT  480
LIDIGGRIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-166	Trihelix family protein