PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0096.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 315aa    MW: 35654.8 Da    PI: 7.261
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0096.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.88e-3285189199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k ltpsdv+k++rlv+pk++ae+h      +g   +++ l++ede g+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F++
  Kaladp0100s0096.1.p  85 FEKPLTPSDVGKLNRLVIPKQHAERHfplntsNGADSGGMLLSFEDEAGKFWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFER 174
                          99***************************9995566799**************************************************8 PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                          + ++  +l+++++r+
  Kaladp0100s0096.1.p 175 HPTDPDRLFIGWRRR 189
                          87788889****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSVNQISPEF LWWSPHHPQQ QQPLVTNSPN SAHNPKSLVF AHHFQNFNLN NPNDNEDDDD  60
RRAEQMNSNN NNNGGSQQQQ LEVMFEKPLT PSDVGKLNRL VIPKQHAERH FPLNTSNGAD  120
SGGMLLSFED EAGKFWRFRY SYWNSSQSYV LTKGWSRYVK EKRLDAGDVV LFERHPTDPD  180
RLFIGWRRRH DPAHQSNSAA AVSGRGLSYP AHHHHHQSYP AHQYRPDPEV SAGGNLVKTG  240
SFNGSSSSRT LRLFGVNMEY QCESDQSEPA TPDGSSASSP SRQAVYQHYY THFYPQASYG  300
MTSHIDASHS QHRG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.12e-67B3 family protein