PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0100s0033.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

DBB

Protein Properties

Length: 307aa MW: 33169 Da PI: 7.2584

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0100s0033.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.9	7.3e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC ++ lC +C H+ H+ Kaladp0100s0033.1.p 4 QCDVCSSSEASVFCSADEAALCSSCDHRVHHAnklaskHQ 43 7****99****************9964446666676 PP
2	zf-B_box	31.1	4.9e-10	56	93	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++C+ ++ek++ lfC++++ lC+dC +++H+ Ht Kaladp0100s0033.1.p 56 VPVCDICQEKRAFLFCQQDRAVLCKDCDFSIHSAneHT 93 689*****************************657765 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MKIQCDVCSS SEASVFCSAD EAALCSSCDH RVHHANKLAS KHQRFSLVMN PDKKDVPVCD 60 ICQEKRAFLF CQQDRAVLCK DCDFSIHSAN EHTQKHNRFL LTGVRLSAHV LSSSAAKTTA 120 SETSLTGSCG LVPEFKSQPL NKRSNSVSNP TLNPQSLAVE RIASPSSSSG GGKSVALKND 180 VGISEYLIEM LPGWHVEDFL DSTSDPDGFS KGDEGMFAFN NGSFQTSNLS SFPSQNAAVW 240 VPQAPQPPSK QASHYAASHL SGNISFKEAT STKSNMQWAD EGFAVPQISP QSTNTSSKRS 300 RPLWYL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	7e-64	DBB family protein