PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0100s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 436aa MW: 46928.2 Da PI: 8.9405

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0100s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.3e-05	205	227	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 Cp Cg++F+ ++L++H+ + H Kaladp0100s0009.1.p 205 ACPQCGEVFPKIESLEHHQAVrH 227 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MISLLSSNEA CSFIIFTFSE LHSPHLLALF FFMALFTFQQ PAPKPNTNKK KWEKEKQNQQ 60 QPPLSSSWHQ IKNLLHCKQT QVILPASGPA KAPVEKQSGS SKNNNGSSNY SCKSICRFGD 120 VVHGNTRVVH RADNSPEGGS AGKESGPKKI NGSARRVVGS GSVRSVGGGS CGPSGLQFRK 180 LSGCYECHTV VDPSRYPVPR GTVCACPQCG EVFPKIESLE HHQAVRHAVS ELGPEDSGRN 240 IVEIIFKSSW LKKDTPICKI ERILKVHNTN RTIQRFEDCR DAIKLRASAS AKKNPRCAAD 300 GNELLRFHCT TLSCALGSRN SSSLCAAIPG CNICTLIRHG FRPSDGGGGV FTAAGSGRAH 360 DGVEENEGQR AMIVCRVVAG RVRREGTAEP EEGGGGSGFD SVAGRAGSYS DLEELTVFNP 420 RAILPCFVVI YKSTE*

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MISLLSSNEA CSFIIFTFSE LHSPHLLALF FFMALFTFQQ PAPKPNTNKK KWEKEKQNQQ  60
QPPLSSSWHQ IKNLLHCKQT QVILPASGPA KAPVEKQSGS SKNNNGSSNY SCKSICRFGD  120
VVHGNTRVVH RADNSPEGGS AGKESGPKKI NGSARRVVGS GSVRSVGGGS CGPSGLQFRK  180
LSGCYECHTV VDPSRYPVPR GTVCACPQCG EVFPKIESLE HHQAVRHAVS ELGPEDSGRN  240
IVEIIFKSSW LKKDTPICKI ERILKVHNTN RTIQRFEDCR DAIKLRASAS AKKNPRCAAD  300
GNELLRFHCT TLSCALGSRN SSSLCAAIPG CNICTLIRHG FRPSDGGGGV FTAAGSGRAH  360
DGVEENEGQR AMIVCRVVAG RVRREGTAEP EEGGGGSGFD SVAGRAGSYS DLEELTVFNP  420
RAILPCFVVI YKSTE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-128	C2H2 family protein