PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0099s0098.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 1297aa MW: 143164 Da PI: 7.3567 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.3 | 1.9e-09 | 1053 | 1095 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT +E e ++d +++G++ +++Ia+++ ++t +c+++++k Kaladp0099s0098.1.p 1053 NPWTSDEKETFLDKLALFGKD-FRKIASYLD-HKTIADCVEFYYK 1095 79*****************99.*********.***********98 PP | |||||||
2 | Myb_DNA-binding | 26.2 | 1.9e-08 | 1212 | 1254 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT eE l++avk +G++ ++ +++++ +R + +ck ++ k+ Kaladp0099s0098.1.p 1212 DWTDEEKHMLLQAVKFYGSN-FEMVSKYVK-TRYRDECKAFYSKV 1254 6*****************99.********9.**********9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1297 aa Download sequence |
MPFPEPVPWD RKEIYRERRP VKSESLGSSP AVSRWRDSSS FSYRADGPRE FYRRGSPDYR 60 RPPGRGRQQG DWHMFPEEPG YGYMPSRSCE RMIEDRSYWP SASRVDGRYR SGKDYYKFRG 120 YQKDWEGHNW QQNFSSPSIS AERPINSSPI FFGGKPSNGF SDIPFERRRN GMFPGFGADR 180 HFNAAPVISG GRQSNGFSGT VNEKARNGFS PRNSSERHIT VSPAVSGDKT CHGFSSAPVE 240 KTRNEYSGAP VVKSHNRFSP SIASARPMSL SSSVSGDKPS DGSSCSLVVT LQNGISPCTA 300 TDRSNNMPPV VSKPCLKFSD AVVQEAHDGF SDAPTENAHE GFSPCIVAER SKKSSPSISR 360 DNPSVQSSGD PLERTPNAFS SGSAIEDMPC HRLSGTSVHS ICNGFSAICD SESSFKTSPV 420 VSVDKSFHGV FVASSGKTCD GIAGSAAASL PQVNSDGKLS SRNASDCLQT GFDCVNEQSE 480 SSLKHQQDGG IGKVNELCTV PRHEKENFLG VDWKPLKWTR SVSLSSRGHS GNSRSAPVDS 540 KEAVDESQQI EGTPLCFPAG DAADCVTSSA TSEEAATRKK ARLGWGQGLA KYEKKVIDDP 600 CDNGKDNEIH IPRVGSECTS TPPVTPAAAY NSSPDNEHKL FKEGNISVCF SMNDSINGQS 660 SFDKLDMSFI TNEVHWLLNL VRSDDQCSTS ASESNNAMCK LLSWKTGILK AVEMTDSEME 720 SLESEIQSSR SEYRSHFHCP AASSSLNVNG GTQLNRKNTA CNPSVLPTPL QVDSSEVRDD 780 IDSPGTATSK PVVSSPEVKA TRGVENVCIF SEDVSANSSH MMDELTPNKE IGCCPSISCD 840 VRASELCSYN PTCPNHDRMD LEDDIRLCKF IFATNKEEAG KASDELAHLL SGDGTSVVNC 900 QKFHNDLSIR DEIAKRKKLL RFTETAITLK YKSLQQLWKE DARLLEMRRN RPKSSKRLEL 960 GSRTSQYVHF KSNSSIRSRF SSPEGSGKLV PSSETISLTS QLLLDCPVKV YRDVLKMPPL 1020 ILDEKEKQMS KFVSYNGLVE DPVALEKERA LTNPWTSDEK ETFLDKLALF GKDFRKIASY 1080 LDHKTIADCV EFYYKNHKSA IFERTRKKPV RFGTQSKPIA KNAYLLTWGD KWNQESAAAA 1140 DVLAGICGSL SSEAVSSCVT SSFDHRDVHR QWKRKKVGGK RKRTWTQEEV TQNIEETCSG 1200 ESCGEMDFSA LDWTDEEKHM LLQAVKFYGS NFEMVSKYVK TRYRDECKAF YSKVKKRLGS 1260 TQAAIEVTAS GIRADSEQDM DMDVRLAIPL PADLVV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52250.1 | 2e-71 | MYB family protein |