PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0099s0098.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 1297aa MW: 143164 Da PI: 7.3567

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0099s0098.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.3	1.9e-09	1053	1095	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT +E e ++d +++G++ +++Ia+++ ++t +c+++++k Kaladp0099s0098.1.p 1053 NPWTSDEKETFLDKLALFGKD-FRKIASYLD-HKTIADCVEFYYK 1095 79***************99.*****.*********98 PP
2	Myb_DNA-binding	26.2	1.9e-08	1212	1254	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT eE l++avk +G++ ++ +++++ +R + +ck ++ k+ Kaladp0099s0098.1.p 1212 DWTDEEKHMLLQAVKFYGSN-FEMVSKYVK-TRYRDECKAFYSKV 1254 6***************99.****9.********9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 1297 aa Download sequence
MPFPEPVPWD RKEIYRERRP VKSESLGSSP AVSRWRDSSS FSYRADGPRE FYRRGSPDYR 60 RPPGRGRQQG DWHMFPEEPG YGYMPSRSCE RMIEDRSYWP SASRVDGRYR SGKDYYKFRG 120 YQKDWEGHNW QQNFSSPSIS AERPINSSPI FFGGKPSNGF SDIPFERRRN GMFPGFGADR 180 HFNAAPVISG GRQSNGFSGT VNEKARNGFS PRNSSERHIT VSPAVSGDKT CHGFSSAPVE 240 KTRNEYSGAP VVKSHNRFSP SIASARPMSL SSSVSGDKPS DGSSCSLVVT LQNGISPCTA 300 TDRSNNMPPV VSKPCLKFSD AVVQEAHDGF SDAPTENAHE GFSPCIVAER SKKSSPSISR 360 DNPSVQSSGD PLERTPNAFS SGSAIEDMPC HRLSGTSVHS ICNGFSAICD SESSFKTSPV 420 VSVDKSFHGV FVASSGKTCD GIAGSAAASL PQVNSDGKLS SRNASDCLQT GFDCVNEQSE 480 SSLKHQQDGG IGKVNELCTV PRHEKENFLG VDWKPLKWTR SVSLSSRGHS GNSRSAPVDS 540 KEAVDESQQI EGTPLCFPAG DAADCVTSSA TSEEAATRKK ARLGWGQGLA KYEKKVIDDP 600 CDNGKDNEIH IPRVGSECTS TPPVTPAAAY NSSPDNEHKL FKEGNISVCF SMNDSINGQS 660 SFDKLDMSFI TNEVHWLLNL VRSDDQCSTS ASESNNAMCK LLSWKTGILK AVEMTDSEME 720 SLESEIQSSR SEYRSHFHCP AASSSLNVNG GTQLNRKNTA CNPSVLPTPL QVDSSEVRDD 780 IDSPGTATSK PVVSSPEVKA TRGVENVCIF SEDVSANSSH MMDELTPNKE IGCCPSISCD 840 VRASELCSYN PTCPNHDRMD LEDDIRLCKF IFATNKEEAG KASDELAHLL SGDGTSVVNC 900 QKFHNDLSIR DEIAKRKKLL RFTETAITLK YKSLQQLWKE DARLLEMRRN RPKSSKRLEL 960 GSRTSQYVHF KSNSSIRSRF SSPEGSGKLV PSSETISLTS QLLLDCPVKV YRDVLKMPPL 1020 ILDEKEKQMS KFVSYNGLVE DPVALEKERA LTNPWTSDEK ETFLDKLALF GKDFRKIASY 1080 LDHKTIADCV EFYYKNHKSA IFERTRKKPV RFGTQSKPIA KNAYLLTWGD KWNQESAAAA 1140 DVLAGICGSL SSEAVSSCVT SSFDHRDVHR QWKRKKVGGK RKRTWTQEEV TQNIEETCSG 1200 ESCGEMDFSA LDWTDEEKHM LLQAVKFYGS NFEMVSKYVK TRYRDECKAF YSKVKKRLGS 1260 TQAAIEVTAS GIRADSEQDM DMDVRLAIPL PADLVV*

Sequence ? help Back to Top

Protein Sequence Length: 1297 aa Download sequence

MPFPEPVPWD RKEIYRERRP VKSESLGSSP AVSRWRDSSS FSYRADGPRE FYRRGSPDYR  60
RPPGRGRQQG DWHMFPEEPG YGYMPSRSCE RMIEDRSYWP SASRVDGRYR SGKDYYKFRG  120
YQKDWEGHNW QQNFSSPSIS AERPINSSPI FFGGKPSNGF SDIPFERRRN GMFPGFGADR  180
HFNAAPVISG GRQSNGFSGT VNEKARNGFS PRNSSERHIT VSPAVSGDKT CHGFSSAPVE  240
KTRNEYSGAP VVKSHNRFSP SIASARPMSL SSSVSGDKPS DGSSCSLVVT LQNGISPCTA  300
TDRSNNMPPV VSKPCLKFSD AVVQEAHDGF SDAPTENAHE GFSPCIVAER SKKSSPSISR  360
DNPSVQSSGD PLERTPNAFS SGSAIEDMPC HRLSGTSVHS ICNGFSAICD SESSFKTSPV  420
VSVDKSFHGV FVASSGKTCD GIAGSAAASL PQVNSDGKLS SRNASDCLQT GFDCVNEQSE  480
SSLKHQQDGG IGKVNELCTV PRHEKENFLG VDWKPLKWTR SVSLSSRGHS GNSRSAPVDS  540
KEAVDESQQI EGTPLCFPAG DAADCVTSSA TSEEAATRKK ARLGWGQGLA KYEKKVIDDP  600
CDNGKDNEIH IPRVGSECTS TPPVTPAAAY NSSPDNEHKL FKEGNISVCF SMNDSINGQS  660
SFDKLDMSFI TNEVHWLLNL VRSDDQCSTS ASESNNAMCK LLSWKTGILK AVEMTDSEME  720
SLESEIQSSR SEYRSHFHCP AASSSLNVNG GTQLNRKNTA CNPSVLPTPL QVDSSEVRDD  780
IDSPGTATSK PVVSSPEVKA TRGVENVCIF SEDVSANSSH MMDELTPNKE IGCCPSISCD  840
VRASELCSYN PTCPNHDRMD LEDDIRLCKF IFATNKEEAG KASDELAHLL SGDGTSVVNC  900
QKFHNDLSIR DEIAKRKKLL RFTETAITLK YKSLQQLWKE DARLLEMRRN RPKSSKRLEL  960
GSRTSQYVHF KSNSSIRSRF SSPEGSGKLV PSSETISLTS QLLLDCPVKV YRDVLKMPPL  1020
ILDEKEKQMS KFVSYNGLVE DPVALEKERA LTNPWTSDEK ETFLDKLALF GKDFRKIASY  1080
LDHKTIADCV EFYYKNHKSA IFERTRKKPV RFGTQSKPIA KNAYLLTWGD KWNQESAAAA  1140
DVLAGICGSL SSEAVSSCVT SSFDHRDVHR QWKRKKVGGK RKRTWTQEEV TQNIEETCSG  1200
ESCGEMDFSA LDWTDEEKHM LLQAVKFYGS NFEMVSKYVK TRYRDECKAF YSKVKKRLGS  1260
TQAAIEVTAS GIRADSEQDM DMDVRLAIPL PADLVV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-71	MYB family protein