PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0098s0232.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 568aa    MW: 65079.3 Da    PI: 7.246
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0098s0232.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.61.9e-29112196186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          rW++qe+l+L+e+r+++++++++++ k+plW+e+s+ m  e+g++rs k+C+ek+enl k+ykk+k+g+ +r  ++ +++++f+qle
  Kaladp0098s0232.1.p 112 RWPRQETLTLLEIRSRLDNKFKEANHKGPLWDEISRIMsDEHGYQRSGKKCREKFENLYKYYKKTKDGKAGR--QDGKHYRFFRQLE 196
                          8*************************************99******************************98..55667******98 PP
2trihelix40.47.8e-13409473159
             trihelix   1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnk 59 
                          +W ++e+ +L++ r  me ++++ +      ++  lWee+++km++ g+++s+ +Ck+kwe++n 
  Kaladp0098s0232.1.p 409 QWAESEITKLVQTRAGMELKFEQYSgqcdwgQEFVLWEEIANKMASLGINKSASMCKNKWESINS 473
                          7*********************854456777*******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MEEHHHNHRQ YEVVPDFGLA PTPCYPCTMH PADIRYVTGS PNSAAQHFDM FMMSHHHQNF  60
QQLLQESDHQ PRSQHHEMMM HNSNHNNGFS ATVGGFAEAN ILDGGSGGGG GRWPRQETLT  120
LLEIRSRLDN KFKEANHKGP LWDEISRIMS DEHGYQRSGK KCREKFENLY KYYKKTKDGK  180
AGRQDGKHYR FFRQLEDLYG ENKTNYVPPL LPLRETSHFL EQNCFEHLKN TPSCCNHANR  240
PKLGSNTNYN SGGHHNFHSL SLSSNSSEFD TISCSEDYND LSGTGVCDNG SSDKKRKGGR  300
NWKAKIKGHI DSQMKRLVEK QEAWLAEIMK TIEQTEKERL LREEEWKTKE VERMDRERMF  360
WANERQWIEA RDANLMEALH KFKGGEVLGA FNCYHFMSAD HIDNKHNNQW AESEITKLVQ  420
TRAGMELKFE QYSGQCDWGQ EFVLWEEIAN KMASLGINKS ASMCKNKWES INSCLVSRNK  480
GDFGYKKQKG DSSRISSSGC YGTGDHGRVE GIPVFGGIGS DQATHNFSSM SSSNMDPTNN  540
SNVQQESFFR FLMVDHVGSE NIWSNKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.13e-84Trihelix family protein