PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0098s0133.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NF-YC | ||||||||
Protein Properties | Length: 257aa MW: 28527.6 Da PI: 6.0197 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 174.3 | 1.3e-54 | 76 | 179 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd 87 ql++fw++q iek+tdfknh+lPlarikki+kadedv+misaeaP+++++ace+fileltlr+w+h+eenkrrtl+k+diaaav+rtd Kaladp0098s0133.2.p 76 QLQAFWSNQkleIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPIIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAVNRTD 165 89******9999****************************************************************************** PP NF-YC 88 ifdflvdivprdel 101 ifdflvdi p+++l Kaladp0098s0133.2.p 166 IFDFLVDILPKEDL 179 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MDQQSLGQSH MTASGVAAAP VAYVTPPYQH NQLTGPANPG PIFAPAPVYS QAAGQLAPHI 60 AFQQINQQQQ QQLQQQLQAF WSNQKLEIEK VTDFKNHSLP LARIKKIMKA DEDVRMISAE 120 APIIFARACE MFILELTLRA WNHTEENKRR TLQKNDIAAA VNRTDIFDFL VDILPKEDLK 180 DEALASIPRG PLPAGGPDML PPYHYMPPQN MPHLGAPGMI MGEPVMDPSL YAHQPHPYMA 240 PQMWPQAPQQ DQSSSE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 155 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 2e-77 | NF-YC family protein |