PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0054.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 432aa MW: 48766.4 Da PI: 6.957

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0054.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.7	9.8e-26	106	207	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tse 74 +Wt+ +v++Li a+ +++++ +++ +kk++W++vs++m+e+gf++sp+qC++k+++lnkryk+++e+ +k+ +++ Kaladp0098s0054.1.p 106 KWTDGMVRLLIMAVYYIGDECGSEGggeagagkkkagalmQKKGKWKSVSRAMMEKGFHVSPQQCEDKFNDLNKRYKRVNEILGKGtACK 195 7************9999999754455677788899999******************************************55 PP trihelix 75 ssstcpyfdqle 86 ++++ +++dq++ Kaladp0098s0054.1.p 196 VVENQSLLDQMD 207 ***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MEGNGLRGGI FSNLSPGILG LEMPIQQQPP PPPQPQPPQQ RPQNPHHFHP QMVAFARPET 60 DHSSQMKQPG YPYAANPRQL SDDEEGGTEE NAADGKRKGS PWQRMKWTDG MVRLLIMAVY 120 YIGDECGSEG GGEAGAGKKK AGALMQKKGK WKSVSRAMME KGFHVSPQQC EDKFNDLNKR 180 YKRVNEILGK GTACKVVENQ SLLDQMDHLT PKSKEEARKL LNSKHLFFRE MCAYHNSCGG 240 GAGHHSPEQA LAPRNSSETL QIHHSNNSHN HSEGEGDDED SENEEDDDSQ NEEEEGEVRC 300 STKRRIEGEA GLRGLEGEVG AVMSDGGRSG WEKREWLKRR MVRVEEERVG QEMEAFEIEK 360 ERLKWAKYSS KKEREMERKR LRNERAKLEN DRMVLLLKHK ELQIMSHFSQ QQQQQMGACN 420 NKRADPSSVT G*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MEGNGLRGGI FSNLSPGILG LEMPIQQQPP PPPQPQPPQQ RPQNPHHFHP QMVAFARPET  60
DHSSQMKQPG YPYAANPRQL SDDEEGGTEE NAADGKRKGS PWQRMKWTDG MVRLLIMAVY  120
YIGDECGSEG GGEAGAGKKK AGALMQKKGK WKSVSRAMME KGFHVSPQQC EDKFNDLNKR  180
YKRVNEILGK GTACKVVENQ SLLDQMDHLT PKSKEEARKL LNSKHLFFRE MCAYHNSCGG  240
GAGHHSPEQA LAPRNSSETL QIHHSNNSHN HSEGEGDDED SENEEDDDSQ NEEEEGEVRC  300
STKRRIEGEA GLRGLEGEVG AVMSDGGRSG WEKREWLKRR MVRVEEERVG QEMEAFEIEK  360
ERLKWAKYSS KKEREMERKR LRNERAKLEN DRMVLLLKHK ELQIMSHFSQ QQQQQMGACN  420
NKRADPSSVT G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	5e-78	Trihelix family protein