PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0096s0113.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 33714.2 Da PI: 8.2801 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.2 | 2.9e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d++++ G g+W+t ++ g+ R++k+c++rw +yl Kaladp0096s0113.1.p 13 KGAWSKQEDQKLIDYIRKNGEGCWRTLPQAAGLLRCGKSCRLRWINYL 60 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Kaladp0096s0113.1.p 66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111 8999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MRKPCCEKQD TNKGAWSKQE DQKLIDYIRK NGEGCWRTLP QAAGLLRCGK SCRLRWINYL 60 RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLANMGI 120 DPNNHKLAKH PSLYHPAQSQ APVAGRNDGS KSATKSSNFH KSNNGVQTAE DEQPKPAAAT 180 NCNIIINSAD DDDDDDGQAI SEAASSLEEA PCSSSLPDLN LDLMISTPSS HPAGQKSNPS 240 NYEDQQRVQQ QVDAAGGRWN SGAPAPSAPG GSAYGSVTSQ NQNDASSNKG EKAIVERQGK 300 RKKSLSSEA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-76 | MYB family protein |