PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0052.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 273aa    MW: 30528.2 Da    PI: 4.8447
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0052.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.3e-161461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd++lv  ++  G  +W+++++  g++R++k+c++rw +yl
  Kaladp0096s0052.1.p 14 KGPWTAEEDKKLVSFITGNGQCCWRAVPKLAGLKRCGKSCRLRWTNYL 61
                         79********************************************97 PP
2Myb_DNA-binding52.98.4e-1770111447
                          S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           ++eE+ l +d+++ lG++ W++Ia++++ gRt++++k++w+++
  Kaladp0096s0052.1.p  70 LSEEEERLVIDLHASLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 111
                          599****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGRQPCCDKL GVKKGPWTAE EDKKLVSFIT GNGQCCWRAV PKLAGLKRCG KSCRLRWTNY  60
LRPDLKRGLL SEEEERLVID LHASLGNRWS KIAAKLPGRT DNEIKNHWNT HIKKKLKKMG  120
IDPITHRPIN KDQESTASVN EINNPNHIKG QLGNADYINV DDEFCEVTTN GSYSVVSSSL  180
GDYRAKESNE SVKAGDSDGE GESKSLMDYV LSEAFWASLD QSELYGEGNA EGLANCWKEE  240
MEEEEEELLG GGSDFGVDWF FNDIIDMNIF NL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22680.14e-85MYB family protein