PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0096s0026.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 220aa MW: 25255 Da PI: 6.8705 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 18 | 64 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W eEd++l ++v ++G ++W+ Ia++ g++R++k+c++rw++yl Kaladp0096s0026.1.p 18 AAWKLEEDQKLEEYVLKHGAKRWNQIAEKTGLNRSGKSCRLRWLNYL 64 58*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.6e-16 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+ +++k+lG++ W++Ia +++ gRt++++k++w+ + Kaladp0096s0026.1.p 70 RGNMSEDEEDLIQRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNFH 114 899*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAAGKTRGSS YKEVTSRAAW KLEEDQKLEE YVLKHGAKRW NQIAEKTGLN RSGKSCRLRW 60 LNYLKPGIKR GNMSEDEEDL IQRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNFHLKTRVL 120 GETETNNIPS KHKTSRTSYY EKEPTTSGNN NHECHAGNPN ANQIDNECQA AGNLNANQIN 180 EADNCFDWSP HISDCSEWVN RLLDLDVEQW LQEDMDILN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27920.1 | 4e-48 | MYB family protein |