PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0807.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NF-X1

Protein Properties

Length: 1118aa MW: 120764 Da PI: 8.0999

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0807.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.7	4.4e-07	379	396	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C ++CH+GpCp+C Kaladp0095s0807.1.p 379 CGNHFCTEICHPGPCPEC 396 ****************** PP
2	zf-NF-X1	21.9	3.8e-07	533	551	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CGkH+C++lCH G C pC Kaladp0095s0807.1.p 533 CGKHSCEALCHSGYCAPCL 551 ******************6 PP
3	zf-NF-X1	16.9	1.4e-05	643	658	1	16
zf-NF-X1 1 CGkHkCqklCHeGpCp 16 CG+H C ++CH+ C+ Kaladp0095s0807.1.p 643 CGMHACTRTCHPSSCD 658 ***************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1118 aa Download sequence
MSSQVRNDRK RYPTQSSRHQ QWIPVGSVTN TVVNTTQLSA APVIANPPQA SAPPVVLDNT 60 STSGSSSGIN VGDPSYSSTQ LSDNRSRGQF ATRGSKGRPF NQRRDKGRGR ERETGDGART 120 ETEEVKDASL PQLVQELQEK LAKGSVECMI CYDMVRRSAP IWSCSSCYSI FHLNCIRKWA 180 RAPTSVDLIA EKNQGVNWRC PGCQSVQLST PKEIRYECFC RKRVDPPSDL YLTPHSCGES 240 CGKPLEKEAP VAGNSKDYLC PHVCVLQCHP GPCPPCKAFA PPCSCPCGKK IITTRCSDRK 300 SVLTCGQRCN KLLDCWRHRC EKVCHVGSCD PCDSMIAASC FCKKKVEVLR CGEMSVKGVV 360 KEEDGVFSCT DACGKKLGCG NHFCTEICHP GPCPECDLVP SRIKTCCCGK TNLVERRESC 420 MDPVPICEKV CEKQLPCGVH LCKEKCHTGN CSPCMTLVTQ KCRCGSTSRT VECHKTINAE 480 EIFTCDKPCG RKKNCGRHRC SERCCPLSSS SSTHIVDWDP HFCSMICGKK LRCGKHSCEA 540 LCHSGYCAPC LETIFTDLTC ACGRTSLPPP LPCGTPPPSC QLPCSVPQPC GHPSSHSCHF 600 GDCPPCSVPV SKECVGSHVI LRNIPCGSKD IRCNKLCGKT RRCGMHACTR TCHPSSCDAP 660 SESNTSSKAS CGQTCGAPRR DCRHTCTAPC HPLASCPDVR CSFPVTITCS CGRITANVPC 720 DAGGSTSGFT GDSLYEASIL QKLPAPLQPV ESNGRKIPLG QRKLTCDDEC AKLERKRVLA 780 DAFDITPPNL DGLHLGENAT LSELLSDLFR RDAKWVMSVE ERCKFLVLGK SRGVASNIKV 840 HVFCPMPKEK RDAMRVIAER WKLAINTAGW EPKRFVVVHV TSRSKAPART LGLKGSVSSS 900 IVHPPVFDPS IDMDPRLVVS LLDLPRDADI SALVLRFGGE CELVWLNDKN ALAVFHDPAR 960 AATAMRRLDH GSVYHGAVTI QSVSASAASP GANPWGGGSK LNPWKDALEE PGWGEGSWGG 1020 ADGSSIKASV VKSAWQKNNG DPITASVNRW SVLGSEVGQS SSVASVDVVD NRKQSASVST 1080 SAMEPQPNLS MPAGQHGGEP SGADATEVVD DWEKAYE*

Sequence ? help Back to Top

Protein Sequence Length: 1118 aa Download sequence

MSSQVRNDRK RYPTQSSRHQ QWIPVGSVTN TVVNTTQLSA APVIANPPQA SAPPVVLDNT  60
STSGSSSGIN VGDPSYSSTQ LSDNRSRGQF ATRGSKGRPF NQRRDKGRGR ERETGDGART  120
ETEEVKDASL PQLVQELQEK LAKGSVECMI CYDMVRRSAP IWSCSSCYSI FHLNCIRKWA  180
RAPTSVDLIA EKNQGVNWRC PGCQSVQLST PKEIRYECFC RKRVDPPSDL YLTPHSCGES  240
CGKPLEKEAP VAGNSKDYLC PHVCVLQCHP GPCPPCKAFA PPCSCPCGKK IITTRCSDRK  300
SVLTCGQRCN KLLDCWRHRC EKVCHVGSCD PCDSMIAASC FCKKKVEVLR CGEMSVKGVV  360
KEEDGVFSCT DACGKKLGCG NHFCTEICHP GPCPECDLVP SRIKTCCCGK TNLVERRESC  420
MDPVPICEKV CEKQLPCGVH LCKEKCHTGN CSPCMTLVTQ KCRCGSTSRT VECHKTINAE  480
EIFTCDKPCG RKKNCGRHRC SERCCPLSSS SSTHIVDWDP HFCSMICGKK LRCGKHSCEA  540
LCHSGYCAPC LETIFTDLTC ACGRTSLPPP LPCGTPPPSC QLPCSVPQPC GHPSSHSCHF  600
GDCPPCSVPV SKECVGSHVI LRNIPCGSKD IRCNKLCGKT RRCGMHACTR TCHPSSCDAP  660
SESNTSSKAS CGQTCGAPRR DCRHTCTAPC HPLASCPDVR CSFPVTITCS CGRITANVPC  720
DAGGSTSGFT GDSLYEASIL QKLPAPLQPV ESNGRKIPLG QRKLTCDDEC AKLERKRVLA  780
DAFDITPPNL DGLHLGENAT LSELLSDLFR RDAKWVMSVE ERCKFLVLGK SRGVASNIKV  840
HVFCPMPKEK RDAMRVIAER WKLAINTAGW EPKRFVVVHV TSRSKAPART LGLKGSVSSS  900
IVHPPVFDPS IDMDPRLVVS LLDLPRDADI SALVLRFGGE CELVWLNDKN ALAVFHDPAR  960
AATAMRRLDH GSVYHGAVTI QSVSASAASP GANPWGGGSK LNPWKDALEE PGWGEGSWGG  1020
ADGSSIKASV VKSAWQKNNG DPITASVNRW SVLGSEVGQS SSVASVDVVD NRKQSASVST  1080
SAMEPQPNLS MPAGQHGGEP SGADATEVVD DWEKAYE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein