PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0599.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 349aa MW: 38642.3 Da PI: 6.054

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0599.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.2e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd + +v ++G+g+W++++++ g++R++k+c++rw++yl Kaladp0095s0599.3.p 15 RGVWSPEEDAKMMAYVSKYGTGNWTAVPKKAGLRRCGKSCRLRWNNYL 62 899********************************************7 PP
2	Myb_DNA-binding	45.3	2.1e-14	70	111	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+el+++++ G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0095s0599.3.p 70 SFTPQEEELIIKLHGAIGTR-WSIIAQQLP-GRTDNDVKNYWNS 111 79****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MMAQSTCCEK MSVKRGVWSP EEDAKMMAYV SKYGTGNWTA VPKKAGLRRC GKSCRLRWNN 60 YLRPDLKHDS FTPQEEELII KLHGAIGTRW SIIAQQLPGR TDNDVKNYWN SKLRKKLQDM 120 GIDPVTHKPY SQILADYGSI GGLRKFGHSL NKDLKNAFTQ IEGNPEEQIV HFSCRDGQVR 180 GAQSHQNVHE STDLLDQLQA IKKFTEAAPG SKNIETAVTA SPQWGYGHPT LSPTSSSSSS 240 ACSAGNTSSS LQGLNWQDYL LDDVFVPSEE NMAEYFMCGD TDGSRKIEGP EPTQALSQSK 300 NIVMDNHGTG ATVIRASDAS FLDEMLAKEN EMMLLEFPSL LEDSTFES*

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MMAQSTCCEK MSVKRGVWSP EEDAKMMAYV SKYGTGNWTA VPKKAGLRRC GKSCRLRWNN  60
YLRPDLKHDS FTPQEEELII KLHGAIGTRW SIIAQQLPGR TDNDVKNYWN SKLRKKLQDM  120
GIDPVTHKPY SQILADYGSI GGLRKFGHSL NKDLKNAFTQ IEGNPEEQIV HFSCRDGQVR  180
GAQSHQNVHE STDLLDQLQA IKKFTEAAPG SKNIETAVTA SPQWGYGHPT LSPTSSSSSS  240
ACSAGNTSSS LQGLNWQDYL LDDVFVPSEE NMAEYFMCGD TDGSRKIEGP EPTQALSQSK  300
NIVMDNHGTG ATVIRASDAS FLDEMLAKEN EMMLLEFPSL LEDSTFES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	4e-68	MYB family protein