PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0599.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 353aa MW: 38928.6 Da PI: 6.054 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.2e-16 | 15 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqkyl 48 rg W++eEd + +v ++G+g+W++++++ ++R++k+c++rw++yl Kaladp0095s0599.1.p 15 RGVWSPEEDAKMMAYVSKYGTGNWTAVPKKAAsgagLRRCGKSCRLRWNNYL 66 899************************************************7 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.1e-14 | 74 | 115 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+el+++++ G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0095s0599.1.p 74 SFTPQEEELIIKLHGAIGTR-WSIIAQQLP-GRTDNDVKNYWNS 115 79******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MMAQSTCCEK MSVKRGVWSP EEDAKMMAYV SKYGTGNWTA VPKKAASGAG LRRCGKSCRL 60 RWNNYLRPDL KHDSFTPQEE ELIIKLHGAI GTRWSIIAQQ LPGRTDNDVK NYWNSKLRKK 120 LQDMGIDPVT HKPYSQILAD YGSIGGLRKF GHSLNKDLKN AFTQIEGNPE EQIVHFSCRD 180 GQVRGAQSHQ NVHESTDLLD QLQAIKKFTE AAPGSKNIET AVTASPQWGY GHPTLSPTSS 240 SSSSACSAGN TSSSLQGLNW QDYLLDDVFV PSEENMAEYF MCGDTDGSRK IEGPEPTQAL 300 SQSKNIVMDN HGTGATVIRA SDASFLDEML AKENEMMLLE FPSLLEDSTF ES* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 9e-66 | MYB family protein |