PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0501.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 798aa MW: 88800.6 Da PI: 5.3276

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0501.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.7	1.6e-19	36	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia+++g gRt+ qc +rwqk+l Kaladp0095s0501.1.p 36 KGQWTAEEDETLRKAVEHYNGKSWKKIAECLG-GRTDVQCLHRWQKVL 82 799***************************.**********986 PP
2	Myb_DNA-binding	49.4	1.1e-15	88	134	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v + G W+ Ia+++ gR +kqc++rw+ +l Kaladp0095s0501.1.p 88 KGPWTKEEDKKIIELVGKNGATKWTNIAKHLT-GRIGKQCRERWYHHL 134 79***************************9.**********886 PP
3	Myb_DNA-binding	47.1	5.6e-15	140	182	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gR+++ +k++w+ Kaladp0095s0501.1.p 140 KENWTQEEELTLIHAHRIYGNK-WAELTKFLP-GRSDNAIKNHWN 182 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MATGREVAIS EGGSSDGSSK KRPANRVSGP SRRSTKGQWT AEEDETLRKA VEHYNGKSWK 60 KIAECLGGRT DVQCLHRWQK VLDPALIKGP WTKEEDKKII ELVGKNGATK WTNIAKHLTG 120 RIGKQCRERW YHHLDPAIKK ENWTQEEELT LIHAHRIYGN KWAELTKFLP GRSDNAIKNH 180 WNSSVKKKEE SFMAAGLLSN FPGVPDFGQQ KLSVAFSSTQ QTSGENSHMR GGSEEDGVSE 240 CSQASTTLGC SQTSNDLTIK VESLNPIQEC HKNSLVDGNH SLSCNVGLDE IGDPMLSQSS 300 HIQISQANET SDLPSNDPAS DYLDIPSFEH LFYDEPNQCQ NSFPETQGQE FYQSSHDDFS 360 YINQYDMNPT EIASENKVVY EESESGSHRI HAMAKSPDKS QCCTPMEVQP ALVHGEKINN 420 GGAAYYEPPH LTNLDIPFVS CDLVQSGDFL EEEYSPLGIR QLLLMNSFSP LRLWDDSPEA 480 GLKSATKTFT RTPSILKKRH RDLLSPLSEK RVDKKQDSEL EQSSFSGLAQ DTSQFNDDRK 540 ENFDPVLKTD EKDQIEGLSC ERVLEDINRD PKAHLDANDA THAVTPVHQS SEDLADKEIE 600 KLILFSPRVQ IQAEKELYAK GYLNLTALPG NSTESDRYTA NEIISFHTHS LTPRSRGIMV 660 KKPFIDADSD KSSRSEGTPF KIFFESPTLD SPLFAKLFLP GPRIDTDISI EDIGYLITPD 720 SKSYDAIGIM KKLSEQTSKT FITGPNIASN TVSLNAGNGI SPTPDKHPEA DRHSGSDILM 780 ERRVLDFSDC GSPEKSK*

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MATGREVAIS EGGSSDGSSK KRPANRVSGP SRRSTKGQWT AEEDETLRKA VEHYNGKSWK  60
KIAECLGGRT DVQCLHRWQK VLDPALIKGP WTKEEDKKII ELVGKNGATK WTNIAKHLTG  120
RIGKQCRERW YHHLDPAIKK ENWTQEEELT LIHAHRIYGN KWAELTKFLP GRSDNAIKNH  180
WNSSVKKKEE SFMAAGLLSN FPGVPDFGQQ KLSVAFSSTQ QTSGENSHMR GGSEEDGVSE  240
CSQASTTLGC SQTSNDLTIK VESLNPIQEC HKNSLVDGNH SLSCNVGLDE IGDPMLSQSS  300
HIQISQANET SDLPSNDPAS DYLDIPSFEH LFYDEPNQCQ NSFPETQGQE FYQSSHDDFS  360
YINQYDMNPT EIASENKVVY EESESGSHRI HAMAKSPDKS QCCTPMEVQP ALVHGEKINN  420
GGAAYYEPPH LTNLDIPFVS CDLVQSGDFL EEEYSPLGIR QLLLMNSFSP LRLWDDSPEA  480
GLKSATKTFT RTPSILKKRH RDLLSPLSEK RVDKKQDSEL EQSSFSGLAQ DTSQFNDDRK  540
ENFDPVLKTD EKDQIEGLSC ERVLEDINRD PKAHLDANDA THAVTPVHQS SEDLADKEIE  600
KLILFSPRVQ IQAEKELYAK GYLNLTALPG NSTESDRYTA NEIISFHTHS LTPRSRGIMV  660
KKPFIDADSD KSSRSEGTPF KIFFESPTLD SPLFAKLFLP GPRIDTDISI EDIGYLITPD  720
SKSYDAIGIM KKLSEQTSKT FITGPNIASN TVSLNAGNGI SPTPDKHPEA DRHSGSDILM  780
ERRVLDFSDC GSPEKSK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-95	MYB family protein