PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0347.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 310aa    MW: 34597.4 Da    PI: 6.5044
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0347.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.75.7e-181461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd++lv+ ++ +G g+W+t + + g+ R++k+c++rw +yl
  Kaladp0095s0347.1.p 14 KGPWTPEEDQKLVEHIQIHGCGNWRTLPGRAGLERCGKSCRLRWTNYL 61
                         79********************************************97 PP
2Myb_DNA-binding55.99.6e-1867111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rgr++ eE+e +++++  lG++ W+tIa++++ gRt++++k++w+++
  Kaladp0095s0347.1.p  67 RGRFSVEEEEAIIHLHSILGNK-WATIAARLP-GRTDNEIKNYWNTH 111
                          89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGRPPCCDKD GLKKGPWTPE EDQKLVEHIQ IHGCGNWRTL PGRAGLERCG KSCRLRWTNY  60
LRPDIKRGRF SVEEEEAIIH LHSILGNKWA TIAARLPGRT DNEIKNYWNT HIKKRLLRMG  120
IDPVTHRPRL DLLDLSAILD ANFYNGQMAF HQPQRDALVH SELLGSQRAL FQNQDFYMPN  180
IHSTIGDEHD GFYRQHGLAI YNEAQVVGNA STCDSWRGSE MGLVGDQIPD QPIYDQNGFY  240
GGSAQVGSGT DSSASASTSN SSNLMSHFDS YPSFNSRASN TSTVANETFD MQNLLDEFVY  300
SCLASGSNN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.13e-84MYB family protein