PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0245.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 298aa MW: 33432.8 Da PI: 8.2678 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.001 | 5 | 27 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F + ++ H+r+H Kaladp0095s0245.1.p 5 HSCKICNRKFANGKSMGGHMRSH 27 79*******************99 PP | |||||||
2 | zf-C2H2 | 14.4 | 0.00011 | 197 | 218 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C+k+F++ L H+r+H Kaladp0095s0245.1.p 197 RCQMCKKVFKNYQALGGHMRNH 218 6********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MELKHSCKIC NRKFANGKSM GGHMRSHFAK LPILSSSSAS RQPESLNARA PVTCLSSSYD 60 PLSQKLDYGC GGYQAKNATS ANRISAMAAL RVRASSRKRS KRIPRFIKKE SKPISAPPLD 120 PRYGEFTSPE TLVFVEDAAR CLMKLSKDKW PENDERLHGN HFPYFVETHS EDDTLSDEEE 180 DEEGDLSEPV EEIFGRRCQM CKKVFKNYQA LGGHMRNHRR PPVARPVPVV EKRVFQCEIC 240 LKVFGSGQAL GGHKKVHLFM DKKNVIENDL PIFENDPDSD CEFRSESTSA SETSSDT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 2e-19 | C2H2 family protein |