PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0048.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 482aa MW: 51988 Da PI: 5.8674

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0048.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.2	2.1e-06	13	75	6	56
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft++++ e+e++ ++ n+ p +e LA+k ++ +qV +WFqN+R+ k Kaladp0095s0048.1.p 13 RFTPSEVAEMEAFLQQhnNNLPPRELFVTLAEKFsngpdrvgkiVVQMKQVWNWFQNKRYALK 75 6999*****99997658889999999*********99999***********9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MGRPPGNGGP AFRFTPSEVA EMEAFLQQHN NNLPPRELFV TLAEKFSNGP DRVGKIVVQM 60 KQVWNWFQNK RYALKAKSNK APAKFDAAPL QAVPPLPAAL APALHTIPPV RQEVDGSPSS 120 NMARSLAPHS GKASINMEFE ARSARDGAWY DVAAFLSVRN KDTDDPEVLV RFVGLTPEED 180 EWIKVSKHVR HRSLPCEASE CVAVLPGDLI LCFQEAPDQA LYFDAHVLDA QRMKHDSRGC 240 RCRFLVRYDH DQFEEIVPLR KICRRPETDY RLQIYQTLRD LPTQEKKIDE SSACSVPLAN 300 NSLAESVQMP EKVDDNTVAA SSAAANQPDR ATVPSSPFAH ERSKGSPEEG NVGNAAGGNA 360 SKGTRKAEEN LEKDDAVTKR PRKSDPVENP VGQDASTPPT VPESDKQDEI QGLAVSAAAE 420 KGSSHAVAKE KEAGPTVSKD GAAVEAGNPN PTGVALTCQN QTNGGSSGGS SDVPVGAQQC 480 F*

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MGRPPGNGGP AFRFTPSEVA EMEAFLQQHN NNLPPRELFV TLAEKFSNGP DRVGKIVVQM  60
KQVWNWFQNK RYALKAKSNK APAKFDAAPL QAVPPLPAAL APALHTIPPV RQEVDGSPSS  120
NMARSLAPHS GKASINMEFE ARSARDGAWY DVAAFLSVRN KDTDDPEVLV RFVGLTPEED  180
EWIKVSKHVR HRSLPCEASE CVAVLPGDLI LCFQEAPDQA LYFDAHVLDA QRMKHDSRGC  240
RCRFLVRYDH DQFEEIVPLR KICRRPETDY RLQIYQTLRD LPTQEKKIDE SSACSVPLAN  300
NSLAESVQMP EKVDDNTVAA SSAAANQPDR ATVPSSPFAH ERSKGSPEEG NVGNAAGGNA  360
SKGTRKAEEN LEKDDAVTKR PRKSDPVENP VGQDASTPPT VPESDKQDEI QGLAVSAAAE  420
KGSSHAVAKE KEAGPTVSKD GAAVEAGNPN PTGVALTCQN QTNGGSSGGS SDVPVGAQQC  480
F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-121	HB-other family protein