PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0094s0012.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 546aa MW: 59812 Da PI: 7.4983

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0094s0012.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.3	1.6e-41	170	246	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ k+yh+rh+vC++hsk+++v+v+g+eqrfCqqCsrfh l efDe+krsCrrrLa+hnerrrk++ Kaladp0094s0012.1.p 170 TCQVYGCNKDLSSSKDYHKRHRVCDTHSKTAKVIVKGIEQRFCQQCSRFHLLAEFDEGKRSCRRRLAGHNERRRKPH 246 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MQPHVMESWC QKGSVSGDLV YVPDSLGRHS KLLEVNGPVL GDNKLISEKG SDSIVEEVRY 60 STLSGNPFLT NFAWDVRFNK GSTGEQIAPT MSSPNLFLAD DGFSSKLPSP FSDSNCQEST 120 HIDLKLGRVA DYGGSKTFKL FPGSSMVFSA ESSTPIKRTR SAGLNSQTFT CQVYGCNKDL 180 SSSKDYHKRH RVCDTHSKTA KVIVKGIEQR FCQQCSRFHL LAEFDEGKRS CRRRLAGHNE 240 RRRKPHMGKH CGRSGRFQSY HGGAFNGISF TKTSSVCENM VPTNQLQLEK LGENGWNQHI 300 KLEFESNYNN LFGFLPANGN LLPKSSLPDV NLGKQYPCLY EGQANHLLRS VTTRSTGDDY 360 SHGMPGLPCS DLSYSVTSGG NQDSKVFCIE PAFNDFSTTM SPGALSLLSS QSQDSPNYST 420 GIPMTQASSI TGNPANCSGI PVSDTLLTAI PVASVNGMSH KLASCGLRSE ISNLCPILIP 480 DDRVGVHFED SELFHGLTAD TDRLSCEDEL TIDLLQLSSQ LQRVERQKQF VYATSHTTMN 540 TTARQ*

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MQPHVMESWC QKGSVSGDLV YVPDSLGRHS KLLEVNGPVL GDNKLISEKG SDSIVEEVRY  60
STLSGNPFLT NFAWDVRFNK GSTGEQIAPT MSSPNLFLAD DGFSSKLPSP FSDSNCQEST  120
HIDLKLGRVA DYGGSKTFKL FPGSSMVFSA ESSTPIKRTR SAGLNSQTFT CQVYGCNKDL  180
SSSKDYHKRH RVCDTHSKTA KVIVKGIEQR FCQQCSRFHL LAEFDEGKRS CRRRLAGHNE  240
RRRKPHMGKH CGRSGRFQSY HGGAFNGISF TKTSSVCENM VPTNQLQLEK LGENGWNQHI  300
KLEFESNYNN LFGFLPANGN LLPKSSLPDV NLGKQYPCLY EGQANHLLRS VTTRSTGDDY  360
SHGMPGLPCS DLSYSVTSGG NQDSKVFCIE PAFNDFSTTM SPGALSLLSS QSQDSPNYST  420
GIPMTQASSI TGNPANCSGI PVSDTLLTAI PVASVNGMSH KLASCGLRSE ISNLCPILIP  480
DDRVGVHFED SELFHGLTAD TDRLSCEDEL TIDLLQLSSQ LQRVERQKQF VYATSHTTMN  540
TTARQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	4e-46	SBP family protein