PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0093s0175.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 486aa MW: 53667.4 Da PI: 4.503

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0093s0175.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.5e-15	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W Ed +l+d+vk++G g+W+++ + g+ R++k+c++rw ++l Kaladp0093s0175.1.p 32 KGSWVSSEDAILADYVKKHGEGNWNAVQKFSGLSRCGKSCRLRWVNHL 79 799******************************************996 PP
2	Myb_DNA-binding	48.7	1.8e-15	85	128	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++ eE+ ++++++++lG++ W++ a++++ gRt++++k++w++ Kaladp0093s0175.1.p 85 KGAFSLEEERKIIELHAKLGNK-WSRLAAELP-GRTDNDIKNFWNT 128 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MERHMSDEIS DSPSGEEVDG EGKLSGRGPL NKGSWVSSED AILADYVKKH GEGNWNAVQK 60 FSGLSRCGKS CRLRWVNHLK SNLKKGAFSL EEERKIIELH AKLGNKWSRL AAELPGRTDN 120 DIKNFWNTRI KKLQRAGLPI YPPDVCLKKA NDSQKSPDSG TLSDHLTSGH FFMEASNFVI 180 PEFKIERPLD LRLYSYPSPF LDSPTSNMLP QGLDHPQERP PESNNTPRGL CNTDAWEKQH 240 PLYQLPPPPE SHSCADPSLC FPVVSHALIN GNPSSFEPDF GSVKLELPSL QSLESDFILG 300 DDSATPILPF EDSDPLAQFT QAGTNPLQYT PDTDGLLESV ICPPKSAKSS KDEFGETYPE 360 HKTTGDGDDL YFDFSGNELE AFAGHITPMD ASIPSIFSDF TTSIDELQST EVGTEPGTLY 420 ADFEQYLTCP NMNGNSDPYQ LDPSRPDTWF NANLLSPNSE QGRNYHTLQQ ALSAIAGNDT 480 QQLQP*

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MERHMSDEIS DSPSGEEVDG EGKLSGRGPL NKGSWVSSED AILADYVKKH GEGNWNAVQK  60
FSGLSRCGKS CRLRWVNHLK SNLKKGAFSL EEERKIIELH AKLGNKWSRL AAELPGRTDN  120
DIKNFWNTRI KKLQRAGLPI YPPDVCLKKA NDSQKSPDSG TLSDHLTSGH FFMEASNFVI  180
PEFKIERPLD LRLYSYPSPF LDSPTSNMLP QGLDHPQERP PESNNTPRGL CNTDAWEKQH  240
PLYQLPPPPE SHSCADPSLC FPVVSHALIN GNPSSFEPDF GSVKLELPSL QSLESDFILG  300
DDSATPILPF EDSDPLAQFT QAGTNPLQYT PDTDGLLESV ICPPKSAKSS KDEFGETYPE  360
HKTTGDGDDL YFDFSGNELE AFAGHITPMD ASIPSIFSDF TTSIDELQST EVGTEPGTLY  420
ADFEQYLTCP NMNGNSDPYQ LDPSRPDTWF NANLLSPNSE QGRNYHTLQQ ALSAIAGNDT  480
QQLQP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	4e-63	MYB family protein