PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0093s0085.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 336aa MW: 36694.4 Da PI: 8.943

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0093s0085.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48	2.2e-15	163	208	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L ++++Y+k+Lq Kaladp0093s0085.2.p 163 HNQSERKRRDKINQRMKTLQKLVPNS-----NKTDKASMLDEVIDYLKQLQ 208 9**********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MVMDALVPLC SNTNNNNCNC NNNNNNGNNP DEDSNARGTV GHTHVGSCSA GMKRTRQGVR 60 QVPVVGQDWS ARSEYSANSS RQQQVTVDTC TERDQGTTAF TSTSVWSAEN TSSGMPCTRL 120 TGDDHDSICH SRSIMKNERG SGENKKQKAS NNSAKRSRAA DIHNQSERKR RDKINQRMKT 180 LQKLVPNSNK TDKASMLDEV IDYLKQLQAQ VNMMNRMNMP QMAMMPMALN QQAALQMTMM 240 AQMGMGGMLD MNTAAAMAAG RASMQPILHP SAAAAAFMPM PPASWDAAAQ AMMSDPMSAF 300 LACQQSQPMT MDAYRMMASL YQHMQQAQQA PNSKS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	172	ERKRRD
2	168	173	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-37	bHLH family protein