PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0030.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 805aa    MW: 87090.8 Da    PI: 5.9136
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0030.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.47.7e-21115170156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++ +++t++q++eLe+lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  Kaladp0093s0030.1.p 115 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 170
                          688999***********************************************999 PP
2START196.41.3e-613225461206
                          HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.... CS
                START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.... 77 
                          ela++a++elvk+a+ +ep+W  s     e +n+de++++f++  +     + +ea+r++g v+ ++  lve+l+d++ +W e+++    
  Kaladp0093s0030.1.p 322 ELALSAMNELVKLAQTDEPLWLPSLdggrEVLNRDEYTRTFTPCIGmkpngFMSEASRETGTVIINSLALVETLMDSN-RWAEMFPcvia 410
                          57899***********************9*************9988999999**************************.*********** PP

                          EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTC CS
                START  78 kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksng 160
                          +  t++vissg      g lqlm aelq+lsplv+ R++ f+R+++ql +g w++vdvS+ds ++ +  s +v +++lpSg+++++++ng
  Kaladp0093s0030.1.p 411 RTGTTDVISSGmggtrnGMLQLMHAELQVLSPLVSvREVNFLRFCKQLAEGAWAVVDVSIDSIRETSGISTYVSCRRLPSGCIVQDMPNG 500
                          *****************************************************************999********************** PP

                          EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                          +skvtwveh++++++++h l+++l++sg+ +ga++wvatlqrqce+
  Kaladp0093s0030.1.p 501 YSKVTWVEHAEYDDSSVHPLYKPLLSSGMGFGAQRWVATLQRQCEC 546
                          ********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
MSSGAYLDEP TSGGGVGGGG RVVVTDASYV VGDCSLSGGA ITPMNKSMFN SSGLSLAIQT  60
SLEGQGEVSR MGENYAAAVG GRRSREEEHE SRSGSDNMDG GSGDDLDGSD NPPRKKRYHR  120
HTPQQIQELE ALFKECPHPD EKQRLELSRR LCLETRQVKF WFQNRRTQMK TQLERHENSM  180
LRAENDKLRA ENMSIKDAMR NAICTNCGGQ AVIGDGSIEE QHLRIDNVRL KDELDRVCGL  240
ASKFLGRPVS SLASTSMTMP SSSLELGVGS SNCFANINAA LPMGTDFIGM MNPVEVVPSS  300
RSTLTNGLIG ADRSMERSLF LELALSAMNE LVKLAQTDEP LWLPSLDGGR EVLNRDEYTR  360
TFTPCIGMKP NGFMSEASRE TGTVIINSLA LVETLMDSNR WAEMFPCVIA RTGTTDVISS  420
GMGGTRNGML QLMHAELQVL SPLVSVREVN FLRFCKQLAE GAWAVVDVSI DSIRETSGIS  480
TYVSCRRLPS GCIVQDMPNG YSKVTWVEHA EYDDSSVHPL YKPLLSSGMG FGAQRWVATL  540
QRQCECLAIL MSSTVTSRDH TAITASGRRS MLKLAQRMTN NFCAGVCASS VHNWNKLNAG  600
NVGEDVRVMT RKSVDDPGEP PGIVLSAATS VWLPVSPQRV FDFLRDERLR SEWDILSNGG  660
PMQEMARIAK GQDHGNCVTL LRASAVNANQ SMLILQETCI DAAGSLVVYA PVDTPAMHLV  720
MNGGDSAYVA LLPSGFAIVP DSPGPVRSQD GSGRAGGSLL TVAFQILVNS LPTAKLTVES  780
IETVNNLISC TVQKIKSALH SETH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein