PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0092s0233.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 502aa MW: 54202.4 Da PI: 8.5522

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0092s0233.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2.1e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0092s0233.1.p 77 FVCEICSKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	12.1	0.00061	153	175	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H r + Kaladp0092s0233.1.p 153 WKCDKCSKKYAVQSDWKAHSRIC 175 58*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MSKLSSLSNE GSVSSSNIRH ESANQNIIYG SLDHQQSFAQ SIQQPAAKKK RNLPGNPDPD 60 AEVIALSPKT LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLKQRSS KEIKKKVYVC 120 PELSCVHHDP ARALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HSRICGTREY 180 RCDCGTLFSR RDSFITHRAF CDALAEESAR GCATTTTNPP IISSHHLPAS DNSLSHINPN 240 YSFAPDHLPM HHHPSSFIPT MKKEHQHGSF PPWLSPYPPP QAHFDLSHSS AIFSTAHGFT 300 GQDLTAGNPS SSPNPNTNSM GPTLPPYPSP PPIMPTSSHM SATALLQKAA QMGSTMSKTG 360 LSQPAAAMIS GRGGGAHHQT HVSADNSFGL NSSSSHDAAV TCATGFLTSF GFDDAFGVML 420 NNHNNNENDP LNTKSRSVTD DDRGTRGGGN EHALTRDFLG LKALSHSDIL SIAGDLGDCV 480 NNNSSAAAAG SHYITTASSE P*

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MSKLSSLSNE GSVSSSNIRH ESANQNIIYG SLDHQQSFAQ SIQQPAAKKK RNLPGNPDPD  60
AEVIALSPKT LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLKQRSS KEIKKKVYVC  120
PELSCVHHDP ARALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HSRICGTREY  180
RCDCGTLFSR RDSFITHRAF CDALAEESAR GCATTTTNPP IISSHHLPAS DNSLSHINPN  240
YSFAPDHLPM HHHPSSFIPT MKKEHQHGSF PPWLSPYPPP QAHFDLSHSS AIFSTAHGFT  300
GQDLTAGNPS SSPNPNTNSM GPTLPPYPSP PPIMPTSSHM SATALLQKAA QMGSTMSKTG  360
LSQPAAAMIS GRGGGAHHQT HVSADNSFGL NSSSSHDAAV TCATGFLTSF GFDDAFGVML  420
NNHNNNENDP LNTKSRSVTD DDRGTRGGGN EHALTRDFLG LKALSHSDIL SIAGDLGDCV  480
NNNSSAAAAG SHYITTASSE P*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-104	C2H2 family protein