PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0092s0144.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | FAR1 | ||||||||
Protein Properties | Length: 129aa MW: 14756.7 Da PI: 8.7376 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63 | 8.4e-20 | 46 | 123 | 4 | 83 |
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklel 83 n+YA + GF +rk+ +s+rnge++++++vC+keg+++ ++ +++++r rtgC+ak+++ ++ +gkw+v+k++ Kaladp0092s0144.1.p 46 NHYAVRRGFGIRKHFLARSRRNGEVIRKEYVCNKEGFKNVVPQT-IDHKKRRRDARTGCQAKMEIGQK-SGKWVVDKFSD 123 79**************************************9999.89999999*************99.9******9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MEDAPIQMDS GNTDNTIVRD ASCEKVVDSL LGKYFDTMEE AYDANNHYAV RRGFGIRKHF 60 LARSRRNGEV IRKEYVCNKE GFKNVVPQTI DHKKRRRDAR TGCQAKMEIG QKSGKWVVDK 120 FSDEVFCC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 1e-15 | FAR1 family protein |