PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0089s0098.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 27709.1 Da PI: 6.5967 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ l+d v ++G g+W++ ++ g+ R++k+c++rw +yl Kaladp0089s0098.1.p 14 KGPWTADEDQVLIDFVSRYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++TteE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l Kaladp0089s0098.1.p 67 RGNFTTEEEDTIINLHHMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MVRAPCCEKM GLKKGPWTAD EDQVLIDFVS RYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TTEEEDTIIN LHHMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLRRKE 120 QQPVEQQVEQ KPQLVTASTS TANNVVARGD DSAPGTCHHH VPPPSPQPSS STTEDISSSF 180 YDNELPQIDE SFWSEVLSEG EMASSNVTFP LSPLSGGFSH GGDCNGMEFW YEVFGRSGEL 240 FLPEML* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-74 | MYB family protein |